• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种受DNA糖基化调节的新型羟甲基胞嘧啶特异性限制酶(PvuRts1I)的分子克隆与表达

Molecular cloning and expression of a novel hydroxymethylcytosine-specific restriction enzyme (PvuRts1I) modulated by glucosylation of DNA.

作者信息

Janosi L, Yonemitsu H, Hong H, Kaji A

机构信息

Department of Microbiology, School of Medicine, University of Pennsylvania, Philadelphia 19104.

出版信息

J Mol Biol. 1994 Sep 9;242(1):45-61. doi: 10.1006/jmbi.1994.1556.

DOI:10.1006/jmbi.1994.1556
PMID:8078071
Abstract

The kanamycin resistance plasmid Rts1 restricts the growth of bacteriophage T2, T4 and T6. The DNA of these phage contains hydroxymethylcytosine (HMC) in place of regular cytosine and is modified by glucosylation. When HMC is not glucosylated, as in the DNA of glucosyl transferase-deficient T4 phage, this restriction becomes less apparent, a phenomenon not observed with any other known restriction systems. On the other hand, glucosylation of HMC in T6 phage leads to a less efficient restriction, while restriction of bacteriophage T2 remains unchanged. The modulating effect of glucose cannot be seen when cells contain a large amount of this enzyme, as in the case when multiple copies of its determinant are present in the cells. T-odd phage and bacteriophage lambda are not restricted by Rts1 suggesting that the restriction is specific to DNA containing HMC. The restriction phenotype is due to a single gene coding for a polypeptide of 293 amino acids. This enzyme has been named PvuRts1I. A gene with the sequence motifs similar to modification enzymes was found upstream of the gene coding for PvuRts1I. This gene, however, neither modifies the restriction phenotype of PvuRts1I, nor codes for detectable modification enzyme. T4 mutants with increased resistance to PvuRts1I appear to have deficiency in their beta-glucosyl transferase enzyme.

摘要

卡那霉素抗性质粒Rts1可限制噬菌体T2、T4和T6的生长。这些噬菌体的DNA含有羟甲基胞嘧啶(HMC)以取代常规胞嘧啶,并通过糖基化进行修饰。当HMC未被糖基化时,如在缺乏糖基转移酶的T4噬菌体的DNA中,这种限制作用就不那么明显,这是任何其他已知限制系统都未观察到的现象。另一方面,T6噬菌体中HMC的糖基化导致限制作用效率降低,而噬菌体T2的限制作用保持不变。当细胞中含有大量这种酶时,如细胞中存在其决定簇的多个拷贝时,就看不到葡萄糖的调节作用。T奇数噬菌体和噬菌体λ不受Rts1的限制,这表明这种限制作用对含有HMC的DNA具有特异性。这种限制表型是由一个编码293个氨基酸的多肽的单一基因引起的。这种酶被命名为PvuRts1I。在编码PvuRts1I的基因上游发现了一个具有与修饰酶相似序列基序的基因。然而,这个基因既不改变PvuRts1I的限制表型,也不编码可检测到的修饰酶。对PvuRts1I具有增强抗性的T4突变体似乎其β-葡萄糖基转移酶存在缺陷。

相似文献

1
Molecular cloning and expression of a novel hydroxymethylcytosine-specific restriction enzyme (PvuRts1I) modulated by glucosylation of DNA.一种受DNA糖基化调节的新型羟甲基胞嘧啶特异性限制酶(PvuRts1I)的分子克隆与表达
J Mol Biol. 1994 Sep 9;242(1):45-61. doi: 10.1006/jmbi.1994.1556.
2
A type IV modification dependent restriction nuclease that targets glucosylated hydroxymethyl cytosine modified DNAs.一种靶向糖基化羟甲基胞嘧啶修饰DNA的IV型修饰依赖性限制性核酸酶。
J Mol Biol. 2007 Feb 23;366(3):768-78. doi: 10.1016/j.jmb.2006.11.051. Epub 2006 Nov 21.
3
Characterization of the 5-hydroxymethylcytosine-specific DNA restriction endonucleases.5-羟甲基胞嘧啶特异性 DNA 限制性内切酶的特性。
Nucleic Acids Res. 2013 Apr;41(7):4198-206. doi: 10.1093/nar/gkt102. Epub 2013 Mar 12.
4
The genome of the pseudo T-even bacteriophages, a diverse group that resembles T4.类T4假T偶数噬菌体的基因组,这是一组多样的噬菌体,与T4噬菌体相似。
J Mol Biol. 1997 Mar 28;267(2):237-49. doi: 10.1006/jmbi.1996.0867.
5
Exclusion of glucosyl-hydroxymethylcytosine DNA containing bacteriophages is overcome by the injected protein inhibitor IPI*.通过注射的蛋白质抑制剂IPI*可克服对含葡萄糖基羟甲基胞嘧啶DNA的噬菌体的排除。
J Mol Biol. 2007 Feb 23;366(3):779-89. doi: 10.1016/j.jmb.2006.11.049. Epub 2006 Nov 18.
6
Structural basis for the substrate selectivity of PvuRts1I, a 5-hydroxymethylcytosine DNA restriction endonuclease.5-羟甲基胞嘧啶DNA限制性内切酶PvuRts1I底物选择性的结构基础
Acta Crystallogr D Biol Crystallogr. 2014 Sep;70(Pt 9):2477-86. doi: 10.1107/S139900471401606X. Epub 2014 Aug 29.
7
[SegE endonuclease from phage T4. I. Cloning, expression, and biochemical characteristics of endonuclease activity].[来自噬菌体T4的SegE核酸内切酶。I.核酸内切酶活性的克隆、表达及生化特性]
Mol Biol (Mosk). 1996 Sep-Oct;30(5):1096-106.
8
[Functional interactions of the genomes of Shigella sonnei phages and Escherichia coli phage T4 in mixed infection].宋内志贺氏菌噬菌体与大肠杆菌噬菌体T4基因组在混合感染中的功能相互作用
Genetika. 1979;15(10):1767-74.
9
[Secondary structure of DNA from T4 and T6 phages].[来自T4和T6噬菌体的DNA二级结构]
Mol Biol (Mosk). 1975 Jul-Aug;9(4):552-5.
10
Crystal structure of the 5hmC specific endonuclease PvuRts1I.PvuRts1I 内切酶的 5hmC 特异性晶体结构。
Nucleic Acids Res. 2014 May;42(9):5929-36. doi: 10.1093/nar/gku186. Epub 2014 Mar 14.

引用本文的文献

1
Characterization of winged helix domain fusion endonucleases as N6-methyladenine-dependent type IV restriction systems.将翼状螺旋结构域融合内切核酸酶鉴定为 N6-甲基腺嘌呤依赖性 IV 型限制系统。
Front Microbiol. 2024 Apr 9;15:1286822. doi: 10.3389/fmicb.2024.1286822. eCollection 2024.
2
Conjugation of plasmid harboring in a clinical strain through the formation of a fusion plasmid.通过融合质粒的形成,在临床菌株中携带的质粒进行接合。
Front Microbiol. 2023 Jan 4;13:1071385. doi: 10.3389/fmicb.2022.1071385. eCollection 2022.
3
Engineering Infrequent DNA Nicking Endonuclease by Fusion of a HI Cleavage-Deficient Mutant and a DNA Nicking Domain.
通过融合HI切割缺陷突变体和DNA切口结构域构建罕见DNA切口内切酶
Front Microbiol. 2022 Feb 1;12:787073. doi: 10.3389/fmicb.2021.787073. eCollection 2021.
4
Identification of Novel Phage Resistance Mechanisms in by Comparative Genomics.通过比较基因组学鉴定[具体研究对象]中的新型噬菌体抗性机制。
Front Microbiol. 2021 Dec 14;12:780559. doi: 10.3389/fmicb.2021.780559. eCollection 2021.
5
Characterization of BisI Homologs.双I同源物的表征
Front Microbiol. 2021 Jul 1;12:689929. doi: 10.3389/fmicb.2021.689929. eCollection 2021.
6
Type II Restriction of Bacteriophage DNA With Modified Pyrimidines.含修饰嘧啶的噬菌体DNA的II型限制作用
Front Microbiol. 2020 Oct 27;11:604618. doi: 10.3389/fmicb.2020.604618. eCollection 2020.
7
Protein Domain Guided Screen for Sequence Specific and Phosphorothioate-Dependent Restriction Endonucleases.基于蛋白质结构域的序列特异性和硫代磷酸酯依赖性限制性内切核酸酶筛选
Front Microbiol. 2020 Aug 18;11:1960. doi: 10.3389/fmicb.2020.01960. eCollection 2020.
8
Restriction and modification of deoxyarchaeosine (dG)-containing phage 9 g DNA.含脱氧腺嘌呤(dG)噬菌体 9g DNA 的限制与修饰。
Sci Rep. 2017 Aug 21;7(1):8348. doi: 10.1038/s41598-017-08864-4.
9
Molecular Basis for Lytic Bacteriophage Resistance in Enterococci.肠球菌中溶菌性噬菌体抗性的分子基础
mBio. 2016 Aug 30;7(4):e01304-16. doi: 10.1128/mBio.01304-16.
10
Expression and purification of the modification-dependent restriction enzyme BisI and its homologous enzymes.修饰依赖性限制酶BisI及其同源酶的表达与纯化
Sci Rep. 2016 Jun 29;6:28579. doi: 10.1038/srep28579.