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用于细菌分类学的软件工具和数据库及其通过全球网络的传播。

Software tools and databases for bacterial systematics and their dissemination via global networks.

作者信息

Canhos V P, Manfio G P, Blaine L D

机构信息

Tropical Data Base (BDT), Campinas, SP, Brazil.

出版信息

Antonie Van Leeuwenhoek. 1993;64(3-4):205-29. doi: 10.1007/BF00873083.

Abstract

The dynamic expansion of the taxonomic knowledge base is fundamental to further developments in biotechnology and sustainable conservation strategies. The vast array of software tools for numerical taxonomy and probabilistic identification, in conjunction with automated systems for data generation are allowing the construction of large computerised strain databases. New techniques available for the generation of chemical and molecular data, associated with new software tools for data analysis, are leading to a quantum leap in bacterial systematics. The easy exchange of data through an interactive and highly distributed global computer network, such as the Internet, is facilitating the dissemination of taxonomic data. Relevant information for comparative sequence analysis, ribotyping, protein and DNA electrophoretic pattern analysis is available on-line through computerised networks. Several software packages are available for the analysis of molecular data. Nomenclatural and taxonomic 'Authority Files' are available from different sources together with strain specific information. The increasing availability of public domain software, is leading to the establishment and integration of public domain databases all over the world, and promoting co-operative research projects on a scale never seen before.

摘要

分类学知识库的动态扩展是生物技术进一步发展和可持续保护策略的基础。大量用于数值分类学和概率鉴定的软件工具,与数据生成自动化系统相结合,使得大型计算机化菌株数据库得以构建。可用于生成化学和分子数据的新技术,与用于数据分析的新软件工具相结合,正在推动细菌分类学实现巨大飞跃。通过交互式且高度分布式的全球计算机网络(如互联网)轻松交换数据,正促进分类学数据的传播。用于比较序列分析、核糖体分型、蛋白质和DNA电泳图谱分析的相关信息可通过计算机网络在线获取。有几个软件包可用于分析分子数据。命名和分类“权威文件”可从不同来源获取,同时还有菌株特定信息。公共领域软件的可用性不断提高,正促使世界各地建立和整合公共领域数据库,并推动前所未有的大规模合作研究项目。

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