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补骨脂素-寡核苷酸缀合物对利什曼原虫mRNA体外翻译的反义效应中,光加成、辅助寡核苷酸和核糖核酸酶H的相对贡献。

Relative contribution of photo-addition, helper oligonucleotide and RNase H to the antisense effect of psoralen-oligonucleotide conjugates, on in vitro translation of Leishmania mRNAs.

作者信息

Pascolo E, Hudrisier D, Sproat B, Nguyen T T, Toulmé J J

机构信息

Laboratoire de Biophysique Moléculaire, INSERM U386, Université de Bordeaux II, France.

出版信息

Biochim Biophys Acta. 1994 Sep 13;1219(1):98-106. doi: 10.1016/0167-4781(94)90251-8.

DOI:10.1016/0167-4781(94)90251-8
PMID:8086483
Abstract

We investigated the properties of two antisense oligonucleotides, 11 alpha Pso and 14TMP, 11 and 14 nucleotides long, respectively, and conjugated to psoralen derivatives. These oligonucleotides were complementary to the mini-exon sequence of Leishmania amazonensis. Upon ultraviolet (UV) irradiation these oligomers were selectively cross-linked to DNA or RNA target sequences, either 14 or 35 nucleotides long. The yield of photo-addition was much lower on the longer targets than on the shorter ones, due to the presence of a hairpin structure. The co-addition of a helper oligonucleotide, whose binding site, on the 35-mer, was adjacent to that of the psoralen-derivatized antisense oligomer, improved the cross-linking efficiency. We then determined the effect of 14TMP on in vitro translation of Leishmania mRNA in cell-free extracts. Non-irradiated antisense oligonucleotide/mRNA complexes reduced the protein synthesis in wheat germ extract but not in rabbit reticulocyte lysate. Conversely, UV irradiation induced a 14TMP-dependent reduction of translation in reticulocyte lysate whereas the inhibition was not improved in the wheat germ extract. These results are discussed with respect to the involvement of RNase-H in the oligonucleotide-mediated effect on protein synthesis.

摘要

我们研究了两种反义寡核苷酸的特性,分别为11αPso和14TMP,长度分别为11和14个核苷酸,并与补骨脂素衍生物偶联。这些寡核苷酸与亚马逊利什曼原虫的小外显子序列互补。经紫外线(UV)照射后,这些寡聚物可选择性地与长度为14或35个核苷酸的DNA或RNA靶序列交联。由于存在发夹结构,较长靶序列上的光加成产率比较短靶序列上的低得多。辅助寡核苷酸的共加成提高了交联效率,该辅助寡核苷酸在35聚体上的结合位点与补骨脂素衍生的反义寡核苷酸的结合位点相邻。然后,我们测定了14TMP对无细胞提取物中亚马逊利什曼原虫mRNA体外翻译的影响。未照射的反义寡核苷酸/mRNA复合物降低了小麦胚芽提取物中的蛋白质合成,但未降低兔网织红细胞裂解物中的蛋白质合成。相反,紫外线照射导致网织红细胞裂解物中翻译的14TMP依赖性降低,而小麦胚芽提取物中的抑制作用未得到改善。就核糖核酸酶H在寡核苷酸介导的蛋白质合成效应中的作用对这些结果进行了讨论。

相似文献

1
Relative contribution of photo-addition, helper oligonucleotide and RNase H to the antisense effect of psoralen-oligonucleotide conjugates, on in vitro translation of Leishmania mRNAs.补骨脂素-寡核苷酸缀合物对利什曼原虫mRNA体外翻译的反义效应中,光加成、辅助寡核苷酸和核糖核酸酶H的相对贡献。
Biochim Biophys Acta. 1994 Sep 13;1219(1):98-106. doi: 10.1016/0167-4781(94)90251-8.
2
Photochemical cross-linking of psoralen-derivatized oligonucleoside methylphosphonates to rabbit globin messenger RNA.补骨脂素衍生的寡核苷膦酸甲酯与兔珠蛋白信使核糖核酸的光化学交联
Biochemistry. 1988 Dec 27;27(26):9113-21. doi: 10.1021/bi00426a008.
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Inhibition of translation initiation by antisense oligonucleotides via an RNase-H independent mechanism.反义寡核苷酸通过一种不依赖核糖核酸酶H的机制抑制翻译起始。
Nucleic Acids Res. 1991 Mar 11;19(5):1113-9. doi: 10.1093/nar/19.5.1113.
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Antisense oligonucleotides containing modified bases inhibit in vitro translation of Leishmania amazonensis mRNAs by invading the mini-exon hairpin.含有修饰碱基的反义寡核苷酸通过侵入小外显子发夹结构来抑制亚马逊利什曼原虫mRNA的体外翻译。
J Biol Chem. 1999 Mar 19;274(12):8191-8. doi: 10.1074/jbc.274.12.8191.
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Photochemically and chemically activatable antisense oligonucleotides: comparison of their reactivities towards DNA and RNA targets.光化学和化学可活化反义寡核苷酸:它们对DNA和RNA靶标的反应性比较。
Nucleic Acids Res. 1994 Nov 11;22(22):4789-95. doi: 10.1093/nar/22.22.4789.
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Antisense effect of oligodeoxynucleotides complementary to the mini-exon sequence of the protozoan parasite Leishmania amazonensis.与原生动物寄生虫亚马逊利什曼原虫小外显子序列互补的寡脱氧核苷酸的反义效应。
Biochimie. 1993;75(1-2):43-7. doi: 10.1016/0300-9084(93)90023-l.
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RNase H is responsible for the non-specific inhibition of in vitro translation by 2'-O-alkyl chimeric oligonucleotides: high affinity or selectivity, a dilemma to design antisense oligomers.核糖核酸酶H负责2'-O-烷基嵌合寡核苷酸对体外翻译的非特异性抑制:高亲和力还是选择性,这是设计反义寡聚物时的一个两难问题。
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Characterization of ribonuclease H activities present in two cell-free protein synthesizing systems, the wheat germ extract and the rabbit reticulocyte lysate.对两种无细胞蛋白质合成系统(小麦胚芽提取物和兔网织红细胞裂解物)中存在的核糖核酸酶H活性的表征。
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Effect of RNA secondary structure and modified bases on the inhibition of trypanosomatid protein synthesis in cell free extracts by antisense oligodeoxynucleotides.RNA二级结构和修饰碱基对反义寡脱氧核苷酸在无细胞提取物中抑制锥虫蛋白质合成的影响。
Nucleic Acids Res. 1990 Aug 25;18(16):4711-7. doi: 10.1093/nar/18.16.4711.

引用本文的文献

1
Targeting nucleic acid secondary structures by antisense oligonucleotides designed through in vitro selection.通过体外筛选设计的反义寡核苷酸靶向核酸二级结构。
Proc Natl Acad Sci U S A. 1996 Oct 1;93(20):10679-84. doi: 10.1073/pnas.93.20.10679.
2
Triplex-forming oligonucleotides trigger conformation changes of a target hairpin sequence.三链形成寡核苷酸触发靶标发夹序列的构象变化。
Nucleic Acids Res. 1996 Sep 1;24(17):3392-8. doi: 10.1093/nar/24.17.3392.