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副伤寒乙沙门氏菌的XbaI-BlnI-CeuI基因组切割图谱。

The XbaI-BlnI-CeuI genomic cleavage map of Salmonella paratyphi B.

作者信息

Liu S L, Hessel A, Cheng H Y, Sanderson K E

机构信息

Salmonella Genetic Stock Centre, Department of Biological Sciences, University of Calgary, Alberta, Canada.

出版信息

J Bacteriol. 1994 Feb;176(4):1014-24. doi: 10.1128/jb.176.4.1014-1024.1994.

Abstract

The genomic cleavage map of Salmonella paratyphi B was determined through digestion with endonucleases and separation of the fragments by pulsed-field gel electrophoresis. The chromosome has 19 XbaI sites, 10 BlnI sites, and 7 CeuI sites. The fragments were arranged in order through excision of fragments from the gel, redigestion with a second enzyme, end labelling with 32P, and reelectrophoresis. Tn10 transposons inserted in 61 different genes of S. typhimurium LT2 were transduced by use of bacteriophage P22 into S. paratyphi B. The locations of Tn10 insertions on the chromosome of S. paratyphi B were determined by use of XbaI and BlnI sites in Tn10, revealing the positions of genes with Tn10 insertions in S. paratyphi B. All seven CeuI sites (in rrl genes for 23S rRNA) and most of the XbaI and BlnI sites in rrn genes for Glt-tRNA are conserved, but only about half of the XbaI and BlnI sites outside rrn genes are conserved. Gene order is identical in the 68 genes that we could compare between S. paratyphi B and S. typhimurium LT2, and the lengths of intervals between the genes are often the same, but there are several instances of differences in interval lengths, indicating that insertions or deletions of DNA have occurred during the evolutionary divergence of these bacteria.

摘要

通过用核酸内切酶消化并利用脉冲场凝胶电泳分离片段,确定了副伤寒沙门氏菌B的基因组切割图谱。该染色体有19个XbaI位点、10个BlnI位点和7个CeuI位点。通过从凝胶中切下片段、用第二种酶重新消化、用32P进行末端标记以及重新电泳,将片段按顺序排列。利用噬菌体P22将插入鼠伤寒沙门氏菌LT2 61个不同基因中的Tn10转座子转导到副伤寒沙门氏菌B中。通过利用Tn10中的XbaI和BlnI位点确定Tn10插入副伤寒沙门氏菌B染色体上的位置,从而揭示了副伤寒沙门氏菌B中存在Tn10插入的基因的位置。所有7个CeuI位点(在23S rRNA的rrl基因中)以及Glt-tRNA的rrn基因中的大多数XbaI和BlnI位点都是保守的,但rrn基因以外的XbaI和BlnI位点只有大约一半是保守的。在我们能够比较的副伤寒沙门氏菌B和鼠伤寒沙门氏菌LT2之间的68个基因中,基因顺序是相同的,基因之间间隔的长度也常常相同,但有几个间隔长度不同的例子,这表明在这些细菌的进化分歧过程中发生了DNA的插入或缺失。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68cf/205152/b6631bfe2c65/jbacter00022-0083-a.jpg

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