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通过14N和13C NMR光谱对钙调蛋白中三甲基赖氨酸115的表征。

Characterization of trimethyllysine 115 in calmodulin by 14N and 13C NMR spectroscopy.

作者信息

Zhang M, Huque E, Vogel H J

机构信息

Department of Biological Sciences, University of Calgary, Alberta, Canada.

出版信息

J Biol Chem. 1994 Feb 18;269(7):5099-105.

PMID:8106489
Abstract

In this paper, we describe three approaches to study the single trimethyllysine 115 in calmodulin. First, 14N NMR spectroscopy has been used as a novel spectroscopic tool. Because of the unique symmetrical tetrahedral substitution of its side chain, the trimethyllysine residue gives rise to a sharp 14N NMR resonance; hence, this has allowed the detection and quantitation of the level of trimethylation. Trimethyllysine side chains of bovine testis calmodulin and yeast cytochrome c were shown to have a high mobility in aqueous solution as determined by 14N NMR relaxation measurements. Second, we have purified mammalian calmodulin from an overproducing Escherichia coli strain. By comparison of the 1H-13C heteronuclear multiple quantum coherence spectra of 13C-dimethylated calmodulin samples from bovine testis and E. coli, the resonance for Lys-115 in bacterially expressed calmodulin could be identified. pH titration experiments showed that epsilon-NH2 group of Lys-115 has a normal pKa value both in the apo and Ca2+ forms of the protein and in a complex of calmodulin with a 22-residue calmodulin-binding peptide derived from myosin light chain kinase. Third, we have shown that mutation of Lys-115 to the uncharged Gln residue does not alter the ability of the protein to stimulate the enzymes cyclic nucleotide phosphodiesterase and myosin light chain kinase. These results show that the trimethylation of Lys-115 is not caused by an unusual pKa and reactivity of its epsilon-NH2 group and that its side chain remains flexible. Moreover, our data suggest that the introduction of a permanent positive charge on Lys-115 by trimethylation is also not the major reason for this specific post-translational modification.

摘要

在本文中,我们描述了三种研究钙调蛋白中单个三甲基赖氨酸115的方法。第一,14N核磁共振光谱已被用作一种新型光谱工具。由于其三甲基赖氨酸残基侧链独特的对称四面体取代,该残基产生了尖锐的14N核磁共振共振;因此,这使得三甲基化水平的检测和定量成为可能。通过14N核磁共振弛豫测量确定,牛睾丸钙调蛋白和酵母细胞色素c的三甲基赖氨酸侧链在水溶液中具有高流动性。第二,我们从过量表达的大肠杆菌菌株中纯化了哺乳动物钙调蛋白。通过比较来自牛睾丸和大肠杆菌的13C-二甲基化钙调蛋白样品的1H-13C异核多量子相干光谱,可以鉴定细菌表达的钙调蛋白中赖氨酸-115的共振峰。pH滴定实验表明,赖氨酸-115的ε-NH2基团在蛋白质的脱辅基和Ca2+形式以及钙调蛋白与源自肌球蛋白轻链激酶的22个残基的钙调蛋白结合肽的复合物中均具有正常的pKa值。第三,我们已经表明,将赖氨酸-115突变为不带电荷的谷氨酰胺残基不会改变该蛋白质刺激环核苷酸磷酸二酯酶和肌球蛋白轻链激酶的能力。这些结果表明,赖氨酸-115的三甲基化不是由其ε-NH2基团异常的pKa和反应性引起的,并且其侧链仍然具有灵活性。此外,我们的数据表明,通过三甲基化在赖氨酸-115上引入永久正电荷也不是这种特定翻译后修饰的主要原因。

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引用本文的文献

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Substrate docking-mediated specific and efficient lysine methylation by the SET domain-containing histone methyltransferase SETD7.通过含有 SET 结构域的组蛋白甲基转移酶 SETD7 的底物对接介导的特异性和高效赖氨酸甲基化。
J Biol Chem. 2019 Sep 6;294(36):13355-13365. doi: 10.1074/jbc.RA119.009630. Epub 2019 Jul 19.
2
Structural elements within the methylation loop (residues 112-117) and EF hands III and IV of calmodulin are required for Lys(115) trimethylation.赖氨酸(115)三甲基化需要甲基化环(残基112 - 117)内的结构元件以及钙调蛋白的EF手型结构域III和IV。
Biochem J. 1999 Jun 1;340 ( Pt 2)(Pt 2):417-24.
3
Protein engineering and NMR studies of calmodulin.
钙调蛋白的蛋白质工程与核磁共振研究。
Mol Cell Biochem. 1995 Aug-Sep;149-150:3-15. doi: 10.1007/BF01076558.
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Reductive methylation and pKa determination of the lysine side chains in calbindin D9k.钙结合蛋白D9k中赖氨酸侧链的还原甲基化及pKa测定
J Protein Chem. 1994 Aug;13(6):527-35. doi: 10.1007/BF01901534.