• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

卢里亚-德尔布吕克波动实验;同时考虑平板计数效率和差异生长速率。

Luria-Delbrück fluctuation experiments; accounting simultaneously for plating efficiency and differential growth rate.

作者信息

Jones M E

机构信息

School of Medicine, Flinders University of South Australia, Adelaide.

出版信息

J Theor Biol. 1994 Feb 7;166(3):355-63. doi: 10.1006/jtbi.1994.1032.

DOI:10.1006/jtbi.1994.1032
PMID:8159019
Abstract

Cells growing in culture are subject to mutation, and as mutation is a random event, the number of mutants in a culture will be a random variable. The size of the clone of mutants arising from a single mutational event depends on the timing of the mutation; the earlier the mutation the larger the corresponding clone of mutants. The frequency with which new mutations arise may be estimated from examining the number of mutants found in a number of parallel cultures, each culture arising from a single cell. An efficient estimator of mutation rate in such an experiment is a maximum likelihood estimator. The use of such an estimator presupposes knowledge of the probability distribution for the number of mutants to be detected in a culture, given the mutation rate. In turn this depends on the probability distribution for the size of the clone of detected mutants arising from any single mutation. This latter distribution depends on the relative cell cycle time, tau, of the mutants, and on the probability, s, that a mutant which exists will be detected. This paper develops the required probability distribution.

摘要

在培养中生长的细胞会发生突变,由于突变是一个随机事件,培养物中突变体的数量将是一个随机变量。由单个突变事件产生的突变体克隆的大小取决于突变发生的时间;突变发生得越早,相应的突变体克隆就越大。新突变出现的频率可以通过检查在许多平行培养物中发现的突变体数量来估计,每个培养物都来自单个细胞。在这样的实验中,突变率的有效估计器是最大似然估计器。使用这样的估计器预先假定已知给定突变率时培养物中要检测到的突变体数量的概率分布。反过来,这又取决于由任何单个突变产生的检测到的突变体克隆大小的概率分布。后一种分布取决于突变体的相对细胞周期时间tau,以及存在的突变体被检测到的概率s。本文推导了所需的概率分布。

相似文献

1
Luria-Delbrück fluctuation experiments; accounting simultaneously for plating efficiency and differential growth rate.卢里亚-德尔布吕克波动实验;同时考虑平板计数效率和差异生长速率。
J Theor Biol. 1994 Feb 7;166(3):355-63. doi: 10.1006/jtbi.1994.1032.
2
The application of a linear algebra to the analysis of mutation rates.线性代数在突变率分析中的应用。
J Theor Biol. 1999 Jul 7;199(1):11-23. doi: 10.1006/jtbi.1999.0933.
3
Improved inference of mutation rates: I. An integral representation for the Luria-Delbrück distribution.突变率推断的改进:I. 卢里亚-德尔布吕克分布的积分表示
Theor Popul Biol. 2001 Feb;59(1):41-8. doi: 10.1006/tpbi.2000.1498.
4
Luria-Delbrück fluctuation analysis: estimating the Poisson parameter in a compound Poisson distribution.卢里亚-德尔布吕克波动分析:估计复合泊松分布中的泊松参数。
Comput Biol Med. 1993 Nov;23(6):525-34. doi: 10.1016/0010-4825(93)90099-m.
5
New algorithms for Luria-Delbrück fluctuation analysis.用于鲁里亚-德尔布吕克波动分析的新算法。
Math Biosci. 2005 Aug;196(2):198-214. doi: 10.1016/j.mbs.2005.03.011.
6
Improved inference of mutation rates: II. Generalization of the Luria-Delbrück distribution for realistic cell-cycle time distributions.突变率推断的改进:II. 针对实际细胞周期时间分布的鲁里亚-德尔布吕克分布的推广
Theor Popul Biol. 2001 Feb;59(1):49-59. doi: 10.1006/tpbi.2000.1504.
7
Mutations and infinity: improved statistical methods for estimating spontaneous rates.突变与无穷:用于估计自发率的改进统计方法。
Environ Mol Mutagen. 1996;28(2):90-9. doi: 10.1002/(SICI)1098-2280(1996)28:2<90::AID-EM4>3.0.CO;2-I.
8
Probability of resistance evolution for exponentially growing virus in the host.宿主体内呈指数增长的病毒产生耐药性进化的概率。
J Theor Biol. 2007 May 21;246(2):323-31. doi: 10.1016/j.jtbi.2007.01.009. Epub 2007 Jan 23.
9
The fixed-size Luria-Delbruck model with a nonzero death rate.具有非零死亡率的固定大小鲁里亚-德尔布吕克模型。
Math Biosci. 2007 Nov;210(1):253-90. doi: 10.1016/j.mbs.2007.04.007. Epub 2007 May 3.
10
On an unbiased and consistent estimator for mutation rates.一种无偏且一致的突变率估计量。
J Theor Biol. 2012 May 7;300:360-7. doi: 10.1016/j.jtbi.2012.01.029. Epub 2012 Feb 8.

引用本文的文献

1
bz-rates: A Web Tool to Estimate Mutation Rates from Fluctuation Analysis.bz-速率:一种通过波动分析估算突变率的网络工具。
G3 (Bethesda). 2015 Sep 2;5(11):2323-7. doi: 10.1534/g3.115.019836.
2
Unbiased estimation of mutation rates under fluctuating final counts.波动最终计数下突变率的无偏估计。
PLoS One. 2014 Jul 2;9(7):e101434. doi: 10.1371/journal.pone.0101434. eCollection 2014.
3
Fluctuation analysis: can estimates be trusted?波动分析:估计值可信吗?
PLoS One. 2013 Dec 9;8(12):e80958. doi: 10.1371/journal.pone.0080958. eCollection 2013.
4
A simple formula for obtaining markedly improved mutation rate estimates.一种用于获得显著改进的突变率估计值的简单公式。
Genetics. 2008 Nov;180(3):1773-8. doi: 10.1534/genetics.108.091777. Epub 2008 Oct 1.
5
Bayesian procedures for the estimation of mutation rates from fluctuation experiments.用于从波动实验估计突变率的贝叶斯方法。
Genetics. 1996 Jan;142(1):313-26. doi: 10.1093/genetics/142.1.313.