Fujinaga M, Berthet-Colominas C, Yaremchuk A D, Tukalo M A, Cusack S
EMBL Grenoble Outstation, France.
J Mol Biol. 1993 Nov 5;234(1):222-33. doi: 10.1006/jmbi.1993.1576.
The three-dimensional structure of the seryl-tRNA synthetase from Thermus thermophilus has been determined and refined at 2.5 A resolution. The final model consists of a dimer of 421 residues each and 190 water molecules. The R-factor is 18.4% for all the data between 10 and 2.5 A resolution. The structure is very similar to that of the homologous enzyme from Escherichia coli, with an r.m.s. difference of 1.5 A for the 357 alpha-carbon atoms considered equivalent. The comparison of the two structures indicates increased hydrophobicity, reduced conformational entropy and reduced torsional strain as possible mechanisms by which thermostability is obtained in the enzyme from the thermophile.
嗜热栖热菌丝氨酰 - tRNA合成酶的三维结构已被测定,并在2.5埃分辨率下进行了精修。最终模型由两个各含421个残基的二聚体和190个水分子组成。对于10至2.5埃分辨率之间的所有数据,R因子为18.4%。该结构与来自大肠杆菌的同源酶非常相似,对于被认为等效的357个α - 碳原子,均方根偏差为1.5埃。两种结构的比较表明,疏水性增加、构象熵降低和扭转应变降低可能是嗜热菌的该酶获得热稳定性的机制。