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老黄色酶的结晶说明了一种增加蛋白质晶体大小的有效策略。

Crystallization of Old Yellow Enzyme illustrates an effective strategy for increasing protein crystal size.

作者信息

Fox K M, Karplus P A

机构信息

Section of Biochemistry, Molecular and Cell Biology, Cornell University, Ithaca, NY 14853.

出版信息

J Mol Biol. 1993 Nov 20;234(2):502-7. doi: 10.1006/jmbi.1993.1604.

Abstract

Old Yellow Enzyme (OYE) was the first flavoenzyme discovered, and has been widely used as a model flavoenzyme. Three crystal forms have been grown from natural protease-nicked OYE and one has been grown from intact recombinant OYE. The recombinant OYE crystals are best suited for structure determination and grow from a solution containing polyethylene glycol and MgCl2. They belong to space group P4(3)2(1)2 with unit cell dimensions a = b = 142.88 A, c = 43.01 A and have a single OYE chain per asymmetric unit. In order to optimize the production of large single crystals, we have carried out a systematic study of crystal size versus drop volume. Crystallographic lore holds that the volume of the medium in which the crystals are grown should have a significant effect on the final size of the crystals produced. However, a systematic investigation of the degree to which the volume of the crystallization sample affects the final size of the crystals has not been reported. In order to investigate this phenomenon, drops were set up in both hanging and sandwich geometry at a variety of drop volumes, but otherwise identical crystallization conditions. A 60-fold increase in drop volume produced a 730-fold increase in crystal volume, and a simultaneous increase in the effective diffraction limit of the crystals from near 2.5 A to well beyond 2.0 A resolution. The dramatic crystal volume increase appears to be due both to the increased amount of protein and the slower equilibration rates associated with larger drops. Our results also emphasize that the quality of diffraction data may often be limited by crystal size rather than intrinsic crystal order even in the case of reasonably sized (200 to 400 microns) crystals.

摘要

老黄色酶(OYE)是最早发现的黄素酶,已被广泛用作黄素酶模型。天然蛋白酶切割的OYE已培养出三种晶体形式,完整的重组OYE培养出了一种晶体形式。重组OYE晶体最适合用于结构测定,它从含有聚乙二醇和氯化镁的溶液中生长。它们属于空间群P4(3)2(1)2,晶胞参数a = b = 142.88 Å,c = 43.01 Å,每个不对称单元有一条OYE链。为了优化大尺寸单晶的生产,我们对晶体尺寸与液滴体积进行了系统研究。晶体学知识认为,晶体生长的介质体积应对最终产生的晶体尺寸有显著影响。然而,尚未有关于结晶样品体积对晶体最终尺寸影响程度的系统研究报道。为了研究这一现象,在悬滴和夹心几何结构中设置了不同体积的液滴,但其他结晶条件相同。液滴体积增加60倍,晶体体积增加730倍,同时晶体的有效衍射极限从近2.5 Å分辨率提高到远超过2.0 Å分辨率。晶体体积显著增加似乎是由于蛋白质数量增加以及与较大液滴相关的平衡速率减慢所致。我们的结果还强调,即使对于尺寸合理(200至400微米)的晶体,衍射数据的质量通常也可能受晶体尺寸限制,而非晶体的内在有序性。

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