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酵母开放阅读框YCR14C编码一种DNAβ聚合酶样酶。

Yeast open reading frame YCR14C encodes a DNA beta-polymerase-like enzyme.

作者信息

Prasad R, Widen S G, Singhal R K, Watkins J, Prakash L, Wilson S H

机构信息

Sealy Center for Molecular Science, University of Texas Medical Branch, Galveston 77555-0851.

出版信息

Nucleic Acids Res. 1993 Nov 25;21(23):5301-7. doi: 10.1093/nar/21.23.5301.

DOI:10.1093/nar/21.23.5301
PMID:8265341
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC310562/
Abstract

We have shown by activity gel that overexpression in E. coli of a yeast chromosome 3 open reading frame (ORF) designated YCR14C and bearing homology to mammalian DNA polymerases beta results in a new DNA polymerase in the host cells. The molecular mass of this enzyme corresponded to the YCR14C-predicted 67 kDa protein, and NH2-terminal amino acid sequencing confirmed that the expressed protein was encoded by the yeast ORF. This new yeast DNA polymerase was purified to homogeneity from E.coli. In a fashion similar to that of mammalian beta-polymerases, the purified yeast enzyme exhibited distributive DNA synthesis on DNA substrate with a single-stranded template and processive gap-filling synthesis on a short-gapped DNA substrate. Activity of this yeast beta-polymerase-like enzyme was sensitive to the beta-polymerase inhibitor ddNTP and resistant to both 1 mM NEM and neutralizing antibody to E. coli DNA polymerase I. These results, therefore, indicate that YCR14C encodes a DNA beta-polymerase-like enzyme in yeast, and we name it DNA polymerase IV. Yeast strains harboring a deletion mutation of the pol IV gene are viable, they exhibit no increase in sensitivity to ultraviolet light, ionizing radiation or alkylating agents, and sporulation and spore viability are not affected in the mutant.

摘要

我们通过活性凝胶证明,在大肠杆菌中过表达一个名为YCR14C的酵母3号染色体开放阅读框(ORF),该阅读框与哺乳动物DNA聚合酶β具有同源性,结果在宿主细胞中产生了一种新的DNA聚合酶。这种酶的分子量与YCR14C预测的67 kDa蛋白相对应,并且氨基末端氨基酸测序证实表达的蛋白由酵母ORF编码。这种新的酵母DNA聚合酶从大肠杆菌中纯化至同质。与哺乳动物β-聚合酶类似,纯化的酵母酶在具有单链模板的DNA底物上表现出分布性DNA合成,在短缺口DNA底物上表现出持续性缺口填充合成。这种酵母β-聚合酶样酶的活性对β-聚合酶抑制剂ddNTP敏感,对1 mM NEM和抗大肠杆菌DNA聚合酶I的中和抗体均有抗性。因此,这些结果表明YCR14C在酵母中编码一种DNAβ-聚合酶样酶,我们将其命名为DNA聚合酶IV。携带pol IV基因缺失突变的酵母菌株是有活力的,它们对紫外线、电离辐射或烷化剂的敏感性没有增加,并且突变体中的孢子形成和孢子活力不受影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29df/310562/9e894bdc8fb3/nar00072-0026-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29df/310562/4e2f2b434ff7/nar00072-0024-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29df/310562/65e0b10ad61e/nar00072-0025-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29df/310562/9e894bdc8fb3/nar00072-0026-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29df/310562/4e2f2b434ff7/nar00072-0024-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29df/310562/65e0b10ad61e/nar00072-0025-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29df/310562/9e894bdc8fb3/nar00072-0026-b.jpg

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本文引用的文献

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Proc Natl Acad Sci U S A. 1993 Jun 1;90(11):4907-11. doi: 10.1073/pnas.90.11.4907.
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Short gap-filling synthesis by DNA polymerase beta is processive.DNA聚合酶β进行的短缺口填补合成是持续的。
J Biol Chem. 1993 Jul 25;268(21):15906-11.
3
Two groups of deoxyribonucleic acid polymerases from Physarum polycephalum classified by differential sensitivity to N-ethylmaleimide, heparin, cytosine arabinoside triphosphate and ethidium bromide: evidence for a beta-like activity.
酿酒酵母 DNA 聚合酶 IV 克服 Rad51 对 DNA 聚合酶 δ 的抑制作用,促进 Rad52 介导的直接重复重组。
Nucleic Acids Res. 2023 Jun 23;51(11):5547-5564. doi: 10.1093/nar/gkad281.
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Endogenous overexpression of an active phosphorylated form of DNA polymerase β under oxidative stress in Trypanosoma cruzi.在氧化应激条件下,克氏锥虫中 DNA 聚合酶 β 的一种活性磷酸化形式的内源性过表达。
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Evidence for abasic site sugar phosphate-mediated cytotoxicity in alkylating agent treated Saccharomyces cerevisiae.烷基化剂处理的酿酒酵母中无碱基位点糖磷酸介导的细胞毒性的证据。
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Biological and therapeutic relevance of nonreplicative DNA polymerases to cancer.非复制性 DNA 聚合酶在癌症中的生物学和治疗相关性。
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Base excision repair and design of small molecule inhibitors of human DNA polymerase β.碱基切除修复和人源 DNA 聚合酶 β 小分子抑制剂的设计。
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