• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

蛋白质中精氨酸与芳香族侧链的平面堆积相互作用。

Planar stacking interactions of arginine and aromatic side-chains in proteins.

作者信息

Flocco M M, Mowbray S L

机构信息

Department of Molecular Biology, Swedish Agricultural University, Uppsala Biomedical Center.

出版信息

J Mol Biol. 1994 Jan 14;235(2):709-17. doi: 10.1006/jmbi.1994.1022.

DOI:10.1006/jmbi.1994.1022
PMID:8289290
Abstract

A parallel stacking arrangement of the guanidinium groups of arginines directly over the center of the rings of aromatic side-chains is observed much more frequently in proteins than would be expected by chance. This type of interaction, which is often found in locations critical to the function, apparently serves to orient the arginine side-chain without interfering with its ability to form hydrogen bonds elsewhere. It is distinct from the interactions which involve the side-chains of asparagine or glutamine, which do frequently assume a nearly planar relationship to the ring, but at a position at or beyond the ring edge.

摘要

在蛋白质中,精氨酸的胍基直接堆叠在芳香族侧链环的中心上方的平行排列方式比随机预期的更为常见。这种相互作用类型经常出现在对功能至关重要的位置,显然有助于精氨酸侧链定向,而不会干扰其在其他地方形成氢键的能力。它与涉及天冬酰胺或谷氨酰胺侧链的相互作用不同,后者确实经常与环呈现近乎平面的关系,但处于环边缘或更远处的位置。

相似文献

1
Planar stacking interactions of arginine and aromatic side-chains in proteins.蛋白质中精氨酸与芳香族侧链的平面堆积相互作用。
J Mol Biol. 1994 Jan 14;235(2):709-17. doi: 10.1006/jmbi.1994.1022.
2
Amino/aromatic interactions in proteins: is the evidence stacked against hydrogen bonding?蛋白质中的氨基/芳香族相互作用:证据是否不利于氢键?
J Mol Biol. 1994 Jun 3;239(2):315-31. doi: 10.1006/jmbi.1994.1370.
3
Common ring motifs in proteins involving asparagine or glutamine amide groups hydrogen-bonded to main-chain atoms.蛋白质中常见的环状基序,涉及与主链原子形成氢键的天冬酰胺或谷氨酰胺酰胺基团。
J Mol Biol. 1993 Jun 5;231(3):888-96. doi: 10.1006/jmbi.1993.1335.
4
Asparagine and glutamine: using hydrogen atom contacts in the choice of side-chain amide orientation.天冬酰胺和谷氨酰胺:利用氢原子接触来选择侧链酰胺的取向。
J Mol Biol. 1999 Jan 29;285(4):1735-47. doi: 10.1006/jmbi.1998.2401.
5
The occurrence of C--H...O hydrogen bonds in alpha-helices and helix termini in globular proteins.球状蛋白质中α螺旋及螺旋末端C--H...O氢键的存在情况。
Proteins. 2004 Sep 1;56(4):768-81. doi: 10.1002/prot.20152.
6
Hydrogen bonding interactions between glutamine and asparagine in alpha-helical peptides.α-螺旋肽中谷氨酰胺和天冬酰胺之间的氢键相互作用。
J Mol Biol. 1997 Sep 26;272(3):465-73. doi: 10.1006/jmbi.1997.1262.
7
Difference FTIR studies reveal nitrogen-containing amino acid side chains are involved in the allosteric regulation of RecA.差示傅里叶变换红外光谱研究表明,含氮氨基酸侧链参与了RecA的变构调节。
Biochemistry. 2005 Jul 19;44(28):9733-45. doi: 10.1021/bi047362u.
8
C-H...pi-interactions in proteins.蛋白质中的C-H...π相互作用
J Mol Biol. 2001 Mar 16;307(1):357-77. doi: 10.1006/jmbi.2000.4473.
9
Hydrogen bonding motifs of protein side chains: descriptions of binding of arginine and amide groups.蛋白质侧链的氢键基序:精氨酸与酰胺基团结合的描述。
Protein Sci. 1995 Jan;4(1):65-74. doi: 10.1002/pro.5560040109.
10
Creation and investigation of protein-core mimetics with parallel and antiparallel aligned amino acids.具有平行和反平行排列氨基酸的蛋白质核心模拟物的创建与研究。
J Org Chem. 2005 May 27;70(11):4452-9. doi: 10.1021/jo0479563.

引用本文的文献

1
Structure of dimerized assimilatory NADPH-dependent sulfite reductase reveals the minimal interface for diflavin reductase binding.二聚化同化型NADPH依赖型亚硫酸盐还原酶的结构揭示了双黄素还原酶结合的最小界面。
Nat Commun. 2025 Mar 26;16(1):2955. doi: 10.1038/s41467-025-58037-5.
2
Structure of dimerized assimilatory NADPH-dependent sulfite reductase reveals the minimal interface for diflavin reductase binding.二聚化同化型NADPH依赖性亚硫酸盐还原酶的结构揭示了双黄素还原酶结合的最小界面。
bioRxiv. 2025 Jan 18:2024.06.14.599029. doi: 10.1101/2024.06.14.599029.
3
Highlighting the Major Role of Cyclin C in Cyclin-Dependent Kinase 8 Activity through Molecular Dynamics Simulations.
通过分子动力学模拟突出细胞周期蛋白 C 在细胞周期蛋白依赖性激酶 8 活性中的主要作用。
Int J Mol Sci. 2024 May 15;25(10):5411. doi: 10.3390/ijms25105411.
4
Effects of arginine on coenzyme-Q10 micelle uptake for mitochondria-targeted nanotherapy in phenylketonuria.精氨酸对苯丙酮尿症靶向线粒体纳米治疗辅酶 Q10 胶束摄取的影响。
Drug Deliv Transl Res. 2024 Jan;14(1):191-207. doi: 10.1007/s13346-023-01392-x. Epub 2023 Aug 9.
5
Subfunctionalization of a monolignol to a phytoalexin glucosyltransferase is accompanied by substrate inhibition.木质素单体到植物抗毒素葡萄糖基转移酶的亚功能化伴随着底物抑制。
Plant Commun. 2023 May 8;4(3):100506. doi: 10.1016/j.xplc.2022.100506. Epub 2022 Dec 24.
6
Structures of a mobile intron retroelement poised to attack its structured DNA target.准备攻击其结构 DNA 靶标的移动内含子 retroelement 的结构。
Science. 2022 Nov 11;378(6620):627-634. doi: 10.1126/science.abq2844. Epub 2022 Nov 10.
7
Interactions, electronic and optical properties of nanographene-peptide complexes: a theoretical study.纳米石墨烯-肽复合物的相互作用、电子和光学性质:一项理论研究。
RSC Adv. 2020 Oct 21;10(63):38654-38662. doi: 10.1039/d0ra07961h. eCollection 2020 Oct 15.
8
Molecular Organisation of Tick-Borne Encephalitis Virus.蜱传脑炎病毒的分子结构
Viruses. 2022 Apr 11;14(4):792. doi: 10.3390/v14040792.
9
Sensitive and specific capture of polystyrene and polypropylene microplastics using engineered peptide biosensors.使用工程化肽生物传感器灵敏且特异性地捕获聚苯乙烯和聚丙烯微塑料。
RSC Adv. 2022 Mar 8;12(13):7680-7688. doi: 10.1039/d1ra08701k.
10
"But Mouse, You Are Not Alone": On Some Severe Acute Respiratory Syndrome Coronavirus 2 Variants Infecting Mice.“但是小鼠,你并不孤单”:关于一些感染小鼠的严重急性呼吸综合征冠状病毒 2 变种。
ILAR J. 2021 Dec 31;62(1-2):48-59. doi: 10.1093/ilar/ilab031.