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1
Structures of randomly generated mutants of T4 lysozyme show that protein stability can be enhanced by relaxation of strain and by improved hydrogen bonding via bound solvent.T4溶菌酶随机生成突变体的结构表明,通过缓解张力以及经由结合溶剂改善氢键作用,可以提高蛋白质的稳定性。
Protein Sci. 1993 Dec;2(12):2226-32. doi: 10.1002/pro.5560021222.
2
Structural and thermodynamic analysis of the binding of solvent at internal sites in T4 lysozyme.T4溶菌酶内部位点溶剂结合的结构与热力学分析
Protein Sci. 2001 May;10(5):1067-78. doi: 10.1110/ps.02101.
3
Alanine scanning mutagenesis of the alpha-helix 115-123 of phage T4 lysozyme: effects on structure, stability and the binding of solvent.噬菌体T4溶菌酶α-螺旋115 - 123的丙氨酸扫描诱变:对结构、稳定性及溶剂结合的影响
J Mol Biol. 1995 Feb 17;246(2):317-30. doi: 10.1006/jmbi.1994.0087.
4
Multiple alanine replacements within alpha-helix 126-134 of T4 lysozyme have independent, additive effects on both structure and stability.T4溶菌酶α-螺旋126-134内的多个丙氨酸替换对结构和稳定性均具有独立的累加效应。
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5
Energetic cost and structural consequences of burying a hydroxyl group within the core of a protein determined from Ala-->Ser and Val-->Thr substitutions in T4 lysozyme.通过T4溶菌酶中丙氨酸到丝氨酸以及缬氨酸到苏氨酸的替换所确定的,将羟基埋藏于蛋白质核心区域的能量消耗和结构后果。
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6
Structural and thermodynamic analysis of the packing of two alpha-helices in bacteriophage T4 lysozyme.噬菌体T4溶菌酶中两个α螺旋堆积的结构与热力学分析
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7
Protein flexibility and adaptability seen in 25 crystal forms of T4 lysozyme.在T4溶菌酶的25种晶体形式中观察到的蛋白质灵活性和适应性。
J Mol Biol. 1995 Jul 21;250(4):527-52. doi: 10.1006/jmbi.1995.0396.
8
Structural analysis of a non-contiguous second-site revertant in T4 lysozyme shows that increasing the rigidity of a protein can enhance its stability.T4溶菌酶中一个非连续第二位点回复突变体的结构分析表明,增加蛋白质的刚性可以提高其稳定性。
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Stability and solvation of Thr/Ser to Ala and Gly mutations at the N-cap of alpha-helices.α-螺旋N端帽处苏氨酸/丝氨酸突变为丙氨酸和甘氨酸后的稳定性及溶剂化作用
FEBS Lett. 1994 Jun 27;347(2-3):304-9. doi: 10.1016/0014-5793(94)00574-5.
10
Determination of alpha-helix propensity within the context of a folded protein. Sites 44 and 131 in bacteriophage T4 lysozyme.在折叠蛋白背景下测定α-螺旋倾向。噬菌体T4溶菌酶中的44位和131位。
J Mol Biol. 1994 Jan 14;235(2):600-24. doi: 10.1006/jmbi.1994.1016.

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7
Substitution of aspartic acid with glutamic acid at position 67 of the BRCA1 RING domain retains ubiquitin ligase activity and zinc(II) binding with a reduced transition temperature.BRCA1 RING 结构域第 67 位天冬氨酸突变为谷氨酸后,仍保留泛素连接酶活性和锌(II)结合能力,但转变温度降低。
J Biol Inorg Chem. 2011 Feb;16(2):217-26. doi: 10.1007/s00775-010-0718-y. Epub 2010 Oct 22.
8
Alteration of T4 lysozyme structure by second-site reversion of deleterious mutations.通过有害突变的第二位点回复来改变T4溶菌酶结构。
Protein Sci. 1997 Nov;6(11):2418-25. doi: 10.1002/pro.5560061115.
9
Design and structural analysis of an engineered thermostable chicken lysozyme.一种工程化热稳定鸡溶菌酶的设计与结构分析
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本文引用的文献

1
Structural basis of amino acid alpha helix propensity.氨基酸α-螺旋倾向的结构基础。
Science. 1993 Jun 11;260(5114):1637-40. doi: 10.1126/science.8503008.
2
Structural and genetic analysis of protein stability.蛋白质稳定性的结构与遗传分析
Annu Rev Biochem. 1993;62:139-60. doi: 10.1146/annurev.bi.62.070193.001035.
3
Development of an in vivo method to identify mutants of phage T4 lysozyme of enhanced thermostability.一种用于鉴定热稳定性增强的噬菌体T4溶菌酶突变体的体内方法的开发。
Protein Sci. 1993 Dec;2(12):2217-25. doi: 10.1002/pro.5560021221.
4
Temperature-sensitive mutations of bacteriophage T4 lysozyme occur at sites with low mobility and low solvent accessibility in the folded protein.噬菌体T4溶菌酶的温度敏感突变发生在折叠蛋白中流动性低且溶剂可及性低的位点。
Biochemistry. 1987 Jun 30;26(13):3754-8. doi: 10.1021/bi00387a002.
5
Enhanced protein thermostability from site-directed mutations that decrease the entropy of unfolding.通过定点突变降低解折叠熵来增强蛋白质热稳定性。
Proc Natl Acad Sci U S A. 1987 Oct;84(19):6663-7. doi: 10.1073/pnas.84.19.6663.
6
Genetic and structural analysis of the protein stability problem.蛋白质稳定性问题的遗传与结构分析
Biochemistry. 1987 Nov 3;26(22):6885-8. doi: 10.1021/bi00396a001.
7
Control of enzyme activity by an engineered disulfide bond.通过工程化二硫键对酶活性的控制。
Science. 1989 Feb 10;243(4892):792-4. doi: 10.1126/science.2916125.
8
Stabilization of phage T4 lysozyme by engineered disulfide bonds.通过工程二硫键实现噬菌体T4溶菌酶的稳定化。
Proc Natl Acad Sci U S A. 1989 Sep;86(17):6562-6. doi: 10.1073/pnas.86.17.6562.
9
Toward a simplification of the protein folding problem: a stabilizing polyalanine alpha-helix engineered in T4 lysozyme.迈向蛋白质折叠问题的简化:在T4溶菌酶中设计的稳定聚丙氨酸α-螺旋。
Biochemistry. 1991 Feb 26;30(8):2012-7. doi: 10.1021/bi00222a001.
10
Structural and thermodynamic analysis of the packing of two alpha-helices in bacteriophage T4 lysozyme.噬菌体T4溶菌酶中两个α螺旋堆积的结构与热力学分析
J Mol Biol. 1991 Sep 20;221(2):647-67. doi: 10.1016/0022-2836(91)80079-a.

T4溶菌酶随机生成突变体的结构表明,通过缓解张力以及经由结合溶剂改善氢键作用,可以提高蛋白质的稳定性。

Structures of randomly generated mutants of T4 lysozyme show that protein stability can be enhanced by relaxation of strain and by improved hydrogen bonding via bound solvent.

作者信息

Pjura P, Matthews B W

机构信息

Institute of Molecular Biology, Howard Hughes Medical Institute, University of Oregon, Eugene 97403.

出版信息

Protein Sci. 1993 Dec;2(12):2226-32. doi: 10.1002/pro.5560021222.

DOI:10.1002/pro.5560021222
PMID:8298466
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2142314/
Abstract

The structures of three mutants of bacteriophage T4 lysozyme selected using a screen designed to identify thermostable variants are described. Each of the mutants has a substitution involving threonine. Two of the variants, Thr 26-->Ser (T26S) and Thr 151-->Ser (T151S), have increased reversible melting temperatures with respect to the wild-type protein. The third, Ala 93-->Thr (A93T), has essentially the same stability as wild type. Thr 26 is in the wall of the active-site cleft. Its replacement with serine results in the rearrangement of nearby residues, most notably Tyr 18, suggesting that the increase in stability may result from the removal of strain. Thr 151 in the wild-type structure is far from the active site and appears to sterically prevent the access of solvent to a preformed binding site. In the mutant, the removal of the methyl group allows access to the solvent binding site and, in addition, the Ser 151 hydroxyl rotates to a new position so that it also contributes to solvent binding. Residue 93 is in a highly exposed site on the surface of the molecule, and presumably is equally solvent exposed in the unfolded protein. It is, therefore, not surprising that the substitution Ala 93-->Thr does not change stability. The mutant structures show how chemically similar mutations can have different effects on both the structure and stability of the protein, depending on the structural context. The results also illustrate the power of random mutagenesis in obtaining variants with a desired phenotype.(ABSTRACT TRUNCATED AT 250 WORDS)

摘要

本文描述了通过筛选鉴定热稳定变体而选出的三种噬菌体T4溶菌酶突变体的结构。每个突变体都有一个涉及苏氨酸的替换。其中两个变体,苏氨酸26突变为丝氨酸(T26S)和苏氨酸151突变为丝氨酸(T151S),相对于野生型蛋白,其可逆解链温度有所升高。第三个变体,丙氨酸93突变为苏氨酸(A93T),其稳定性与野生型基本相同。苏氨酸26位于活性位点裂隙的壁上。用丝氨酸取代它会导致附近残基的重排,最显著的是酪氨酸18,这表明稳定性的增加可能是由于应变的消除。野生型结构中的苏氨酸151远离活性位点,似乎在空间上阻止溶剂进入预先形成的结合位点。在突变体中,甲基的去除允许溶剂进入结合位点,此外,丝氨酸151的羟基旋转到一个新位置,因此它也有助于溶剂结合。残基93位于分子表面的一个高度暴露的位点,推测在未折叠的蛋白质中也同样暴露于溶剂中。因此,丙氨酸93突变为苏氨酸不改变稳定性并不奇怪。突变体结构显示了化学性质相似的突变如何根据结构背景对蛋白质的结构和稳定性产生不同的影响。结果还说明了随机诱变在获得具有所需表型的变体方面的作用。(摘要截断于250字)