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弗氏柠檬酸杆菌中编码CfrBI限制修饰系统的基因的克隆与序列分析

Cloning and sequences of the genes encoding the CfrBI restriction-modification system from Citrobacter freundii.

作者信息

Zakharova M V, Kravetz A N, Beletzkaja I V, Repyk A V, Solonin A S

机构信息

Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, Pushchino, Moscow Region.

出版信息

Gene. 1993 Jul 15;129(1):77-81. doi: 10.1016/0378-1119(93)90698-3.

DOI:10.1016/0378-1119(93)90698-3
PMID:8335262
Abstract

The genes encoding the CfrBI restriction and modification (R-M) systems from Citrobacter freundii and recognizing the sequence 5'-CCWWGG-3' (W = A or T) were cloned in Escherichia coli McrBC- cells. The nucleotide (nt) sequences of the genes were determined. Two large open reading frames were found. Deletion analysis showed that one of them [1128 nt coding for 376 amino acids (aa)] corresponds to a methyltransferase (MTase)-encoding gene and the other (1065 nt coding for 355 aa) to a restriction endonuclease-encoding gene. The genes are oriented divergently and separated by 76 bp. A CfrBI site (5'-m4CCATGG) was found in the intergenic region of the cfrBIRM genes. Analysis of the deduced aa sequence of M.CfrBI made it possible to determine the typical features of a m4C-specific MTase. Limited homology between the M.CfrBI and R.CfrBI proteins was also found.

摘要

编码来自弗氏柠檬酸杆菌的CfrBI限制与修饰(R-M)系统且识别序列5'-CCWWGG-3'(W = A或T)的基因被克隆到大肠杆菌McrBC-细胞中。测定了这些基因的核苷酸(nt)序列。发现了两个大的开放阅读框。缺失分析表明,其中一个[1128 nt编码376个氨基酸(aa)]对应于一个甲基转移酶(MTase)编码基因,另一个(1065 nt编码355个aa)对应于一个限制性内切核酸酶编码基因。这些基因呈反向排列,间隔76 bp。在cfrBIRM基因的基因间区域发现了一个CfrBI位点(5'-m4CCATGG)。对推导的M.CfrBI氨基酸序列的分析使得确定m4C特异性MTase的典型特征成为可能。还发现了M.CfrBI和R.CfrBI蛋白之间的有限同源性。

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引用本文的文献

1
An alternative approach to study the enzymatic specificities of the CfrBI restriction-modification system.一种研究CfrBI限制修饰系统酶特异性的替代方法。
Heliyon. 2019 Jun 8;5(6):e01846. doi: 10.1016/j.heliyon.2019.e01846. eCollection 2019 Jun.
2
DNA methylation at the CfrBI site is involved in expression control in the CfrBI restriction-modification system.CfrBI位点的DNA甲基化参与CfrBI限制修饰系统中的表达调控。
Nucleic Acids Res. 2000 Oct 1;28(19):3817-22. doi: 10.1093/nar/28.19.3817.
3
REBASE--restriction enzymes and methylases.
REBASE——限制性内切酶与甲基化酶。
Nucleic Acids Res. 1994 Sep;22(17):3628-39. doi: 10.1093/nar/22.17.3628.