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A method for studying the structure of uniaxially aligned biopolymers using solid state 15N-nmr: application to Bombyx mori silk fibroin fibers.

作者信息

Nicholson L K, Asakura T, Demura M, Cross T A

机构信息

Department of Chemistry, Florida State University, Tallahassee, 32306.

出版信息

Biopolymers. 1993 May;33(5):847-61. doi: 10.1002/bip.360330513.

DOI:10.1002/bip.360330513
PMID:8343580
Abstract

Recent advances in the application of solid state nmr spectroscopy to uniformly aligned biopolymers have opened a window through which to view the detailed structure of biological macromolecules that are unable to be seen with standard techniques for structure determination such as x-ray diffraction. Atomic resolution structural details are obtained from solid state nmr data in the form of bond orientations, which yield the relative positions of specific atoms within the molecule. For static aligned systems such as fibers, in which rapid reorientation about the axis of alignment does not occur, it has generally been necessary to perform trial and error line-shape simulations to extract structural details from nmr spectra arising from a single type of nuclear spin interaction. In the present work, a new method is developed in which solid state 15N-nmr spectra obtained from uniaxially aligned molecules placed with the axis of alignment both parallel and perpendicular to the magnetic field are analyzed to yield the orientations of specific molecular bonds. Analytical expressions are derived that utilize spectral features read from 15N chemical shift anisotropy line shapes to calculate a discrete number of possible orientations for a specific site. The 15N-1H dipolar interaction is employed to further narrow the number of unique orientations possible for a given site. With this method, a neighborhood of possible orientations is quickly determined, and full line-shape simulations within this region of allowed space can be performed to refine the limits of orientation. This technique demonstrates the use of a single type of isotopic label to determine the orientation of a specific molecular group such as a peptide plane within a protein. Results from the application of this method to the Bombyx mori silk fibroin protein provide structural detail that is consistent with currently accepted structural models based on fiber diffraction studies.

摘要

相似文献

1
A method for studying the structure of uniaxially aligned biopolymers using solid state 15N-nmr: application to Bombyx mori silk fibroin fibers.
Biopolymers. 1993 May;33(5):847-61. doi: 10.1002/bip.360330513.
2
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J Mol Biol. 2001 Feb 16;306(2):291-305. doi: 10.1006/jmbi.2000.4394.
3
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Structure of Bombyx mori silk fibroin before spinning in solid state studied with wide angle x-ray scattering and (13)C cross-polarization/magic angle spinning NMR.利用广角X射线散射和(13)C交叉极化/魔角旋转核磁共振研究家蚕丝素蛋白在纺丝前的固态结构。
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Design, expression and solid-state NMR characterization of silk-like materials constructed from sequences of spider silk, Samia cynthia ricini and Bombyx mori silk fibroins.由蜘蛛丝、蓖麻蚕和家蚕丝心蛋白序列构建的类丝材料的设计、表达及固态核磁共振表征
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J Am Chem Soc. 2008 Mar 26;130(12):4182-6. doi: 10.1021/ja710011d. Epub 2008 Feb 29.

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