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对编码氨甲酰磷酸合成酶的一个古老基因的分子研究。

Molecular studies on an ancient gene encoding for carbamoyl-phosphate synthetase.

作者信息

Schofield J P

机构信息

MRC Molecular Genetics Unit, Cambridge, U.K.

出版信息

Clin Sci (Lond). 1993 Feb;84(2):119-28. doi: 10.1042/cs0840119.

DOI:10.1042/cs0840119
PMID:8382576
Abstract
  1. Carbamoyl-phosphate synthetase (EC 6.3.5.5.) catalyses the synthesis of carbamoyl phosphate, the immediate precursor of arginine and pyrimidine biosynthesis, and is highly conserved throughout evolution. The large subunit of all carbamoyl-phosphate synthetases sequenced to date comprises two highly homologous halves, the product of a proposed ancestral gene duplication. The sequences of the enzymes of Escherichia coli, Drosophila melanogaster, Saccharomyces cerevisiae, rat and Syrian hamster all have duplications, suggesting that this event occurred in the progenote predating the separation of the major phylae. Until now, only limited data on carbamoyl-phosphate synthetase were available for the primitive eukaryote Dictyostelium discoideum and for the Archaea Methanosarcina barkeri MS. The DNA sequence of the D. discoideum carbamoyl-phosphate gene and additional sequence for the carbamoyl-phosphate synthetase gene of M. barkeri MS have been determined, and a duplicated structure for both is clearly demonstrated. 2. Genes with ancient duplications provide unique information on their evolution. A study of the intron/exon organization of the rat carbamoyl-phosphate synthetase I gene and the carbamoyl-phosphate synthetase hamster II gene in the CAD multi-gene complex shows that at least some of their introns are very old. Evidence is provided that some introns must have been present in the ancestral precursor before its duplication. 3. The human carbamoyl-phosphate synthetase I gene has been isolated and characterized. A human liver cDNA library was constructed and probed for carbamoyl-phosphate synthetase I. A human genomic DNA cosmid library was also probed for the carbamoyl-phosphate synthetase I gene. The cDNA sequence of the human carbamoyl-phosphate synthetase I gene has been determined, and work has been initiated to confirm that at least part of this gene is contained within two cosmids spanning 46kb. This will enable future studies to be made on mutations in this gene in the rare autosomal recessive deficiency of carbamoyl-phosphate synthetase I.
摘要
  1. 氨甲酰磷酸合成酶(EC 6.3.5.5.)催化氨甲酰磷酸的合成,氨甲酰磷酸是精氨酸和嘧啶生物合成的直接前体,在整个进化过程中高度保守。迄今为止测序的所有氨甲酰磷酸合成酶的大亚基都由两个高度同源的部分组成,这是一个推测的祖先基因复制的产物。大肠杆菌、黑腹果蝇、酿酒酵母、大鼠和叙利亚仓鼠的酶序列都有重复,这表明该事件发生在主要门类分离之前的原始生物中。到目前为止,关于原始真核生物盘基网柄菌和古菌巴氏甲烷八叠球菌MS的氨甲酰磷酸合成酶只有有限的数据。已经确定了盘基网柄菌氨甲酰磷酸基因的DNA序列以及巴氏甲烷八叠球菌MS氨甲酰磷酸合成酶基因的额外序列,并且两者的重复结构都得到了明确证明。2. 具有古老重复的基因提供了关于其进化的独特信息。对CAD多基因复合体中大鼠氨甲酰磷酸合成酶I基因和仓鼠氨甲酰磷酸合成酶II基因的内含子/外显子组织的研究表明,它们的至少一些内含子非常古老。有证据表明,一些内含子在其复制之前的祖先前体中就一定已经存在。3. 人类氨甲酰磷酸合成酶I基因已被分离和鉴定。构建了人类肝脏cDNA文库并用氨甲酰磷酸合成酶I进行探测。还用人基因组DNA黏粒文库探测氨甲酰磷酸合成酶I基因。已经确定了人类氨甲酰磷酸合成酶I基因的cDNA序列,并且已经开始工作以确认该基因的至少一部分包含在跨越46kb的两个黏粒中。这将使未来能够对这种罕见的常染色体隐性氨甲酰磷酸合成酶I缺乏症中该基因的突变进行研究。

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