Prevelige P E, Thomas D, Aubrey K L, Towse S A, Thomas G J
Department of Biology, Massachusetts Institute of Technology, Cambridge 02139.
Biochemistry. 1993 Jan 19;32(2):537-43. doi: 10.1021/bi00053a019.
In double-stranded DNA bacteriophages, packaging of dsDNA requires the transformation of a precursor procapsid into a mature viral capsid. Lattice expansion and release of scaffolding subunits accompanying DNA packaging. Three-dimensional structures of procapsid and mature phage lattices demonstrate that the capsid transformation involves substantial changes in subunit environment. Since this transformation occurs without subunit dissociation, it represents a transition between at least two stable subunit conformations. Using Raman spectroscopy, we have identified changes in coat protein secondary structure and side-chain environments which accompany the capsid transformation. The subunits of procapsid shells contain only 2.0 +/- 0.4% more alpha-helix and less beta-sheet than those of mature capsids; however, numerous side chains are substantially altered by the transformation, including tyrosines, tryptophans, phenylalanines, and aliphatics, which are widely distributed through the subunit sequence. We propose, therefore, that procapsid expansion is accomplished through the relative motion of coat subunit domains with little change in secondary structure. Such hinge-bending conformational transitions may couple ATP-dependent dsDNA condensation with shell expansion.
在双链DNA噬菌体中,双链DNA的包装需要将前体原衣壳转化为成熟的病毒衣壳。伴随着DNA包装,衣壳晶格扩展并释放支架亚基。原衣壳和成熟噬菌体晶格的三维结构表明,衣壳转化涉及亚基环境的显著变化。由于这种转化在亚基不解离的情况下发生,它代表了至少两种稳定亚基构象之间的转变。利用拉曼光谱,我们确定了衣壳转化过程中衣壳蛋白二级结构和侧链环境的变化。原衣壳壳的亚基比成熟衣壳的亚基仅多含2.0±0.4%的α-螺旋,少含β-折叠;然而,许多侧链因转化而发生了显著变化,包括酪氨酸、色氨酸、苯丙氨酸和脂肪族氨基酸,它们广泛分布于亚基序列中。因此,我们提出,原衣壳的扩展是通过衣壳亚基结构域的相对运动实现的,二级结构变化很小。这种铰链弯曲构象转变可能将ATP依赖的双链DNA浓缩与衣壳扩展耦合起来。