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大肠杆菌trpR基因表达中的移码现象是通过跳过其编码序列的一段来发生的。

Frameshifting in the expression of the E. coli trpR gene occurs by the bypassing of a segment of its coding sequence.

作者信息

Benhar I, Engelberg-Kulka H

机构信息

Department of Molecular Biology, Hebrew University, Hadassah Medical School, Jerusalem, Israel.

出版信息

Cell. 1993 Jan 15;72(1):121-30. doi: 10.1016/0092-8674(93)90056-v.

DOI:10.1016/0092-8674(93)90056-v
PMID:8422674
Abstract

The E. coli trpR gene encodes the 108 amino acid long trp repressor. We have previously shown that a +1 frameshifting event occurs during the expression of trpR. Here we show that the transition from the 0 to the +1 frame of trpR occurs by the bypassing of a 55 nt long segment of the trpR+1-lacZ mRNA. This bypassing event is not pretranslational, and it probably takes place during translation. Two adjacent elements are required: a specific sequence of trpR, which must be preceded by a nonspecific 5' end longer than 10 translatable codons. Unique to trpR-lacZ bypassing is that the 55 nt long region must be translated in frame 0 to enable bypassing into the +1 frame. Translational bypassing as a newly discovered mechanism of gene expression is discussed, and the possible existence of translational introns is suggested.

摘要

大肠杆菌trpR基因编码长度为108个氨基酸的色氨酸阻遏蛋白。我们之前已经表明,在trpR表达过程中会发生+1移码事件。在此我们表明,trpR从0框架到+1框架的转变是通过绕过trpR+1-lacZ mRNA的一段55个核苷酸长的片段实现的。这种绕过事件不是翻译前发生的,可能发生在翻译过程中。需要两个相邻元件:trpR的特定序列,其前面必须有一个比10个可翻译密码子更长的非特异性5'末端。trpR-lacZ绕过的独特之处在于,55个核苷酸长的区域必须在0框架中翻译,才能实现向+1框架的绕过。讨论了翻译绕过这一基因表达新发现机制,并提出了翻译内含子可能存在的观点。

相似文献

1
Frameshifting in the expression of the E. coli trpR gene occurs by the bypassing of a segment of its coding sequence.大肠杆菌trpR基因表达中的移码现象是通过跳过其编码序列的一段来发生的。
Cell. 1993 Jan 15;72(1):121-30. doi: 10.1016/0092-8674(93)90056-v.
2
Frameshifting in the expression of the Escherichia coli trpR gene is modulated by translation initiation.大肠杆菌trpR基因表达中的移码受翻译起始调控。
J Bacteriol. 1993 May;175(10):3204-7. doi: 10.1128/jb.175.10.3204-3207.1993.
3
Frameshifting in the expression of the Escherichia coli trpR gene.大肠杆菌trpR基因表达中的移码现象。
Mol Microbiol. 1992 Oct;6(19):2777-84. doi: 10.1111/j.1365-2958.1992.tb01457.x.
4
Reported translational bypass in a trpR'-lacZ' fusion is accounted for by unusual initiation and +1 frameshifting.在trpR'-lacZ'融合中报道的翻译通读是由异常起始和+1移码造成的。
J Mol Biol. 1997 Aug 29;271(4):491-8. doi: 10.1006/jmbi.1997.1187.
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Translational bypassing: a new reading alternative of the genetic code.翻译通读:遗传密码的一种新的阅读替代方式。
Biochem Cell Biol. 1995 Nov-Dec;73(11-12):1055-9. doi: 10.1139/o95-113.
6
Generation of various amino acids mutants in the trpR gene of Escherichia coli by site-directed mutagenesis.通过定点诱变在大肠杆菌trpR基因中产生各种氨基酸突变体。
J Microbiol Methods. 2007 Jul;70(1):191-5. doi: 10.1016/j.mimet.2007.03.014. Epub 2007 Apr 5.
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The tryptophan repressor sequence is highly conserved among the Enterobacteriaceae.色氨酸阻遏物序列在肠杆菌科细菌中高度保守。
Nucleic Acids Res. 1994 May 25;22(10):1821-9. doi: 10.1093/nar/22.10.1821.
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Trp aporepressor production is controlled by autogenous regulation and inefficient translation.色氨酸阻遏物的产生受自身调节和低效翻译的控制。
Proc Natl Acad Sci U S A. 1982 May;79(10):3120-4. doi: 10.1073/pnas.79.10.3120.
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Nucleotide sequence and expression of Escherichia coli trpR, the structural gene for the trp aporepressor.大肠杆菌色氨酸脱辅基阻遏物的结构基因trpR的核苷酸序列及表达
Proc Natl Acad Sci U S A. 1980 Dec;77(12):7117-21. doi: 10.1073/pnas.77.12.7117.
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Nucleotide sequence of the Salmonella typhimurium trpR gene.鼠伤寒沙门氏菌色氨酸阻遏蛋白基因(trpR基因)的核苷酸序列。
DNA Seq. 1994;4(6):355-60. doi: 10.3109/10425179409010185.

引用本文的文献

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J Bacteriol. 2003 Mar;185(6):1803-7. doi: 10.1128/JB.185.6.1803-1807.2003.
2
Ribosomes can slide over and beyond "hungry" codons, resuming protein chain elongation many nucleotides downstream.核糖体能够滑过并越过“饥饿”密码子,在下游许多核苷酸处重新开始蛋白质链的延伸。
Proc Natl Acad Sci U S A. 1998 Nov 10;95(23):13771-6. doi: 10.1073/pnas.95.23.13771.
3
Identification and analysis of frameshift sites.移码位点的鉴定与分析。
Methods Mol Biol. 1998;77:399-411. doi: 10.1385/0-89603-397-X:399.
4
Translation in plants--rules and exceptions.植物中的翻译——规则与例外
Plant Mol Biol. 1996 Oct;32(1-2):159-89. doi: 10.1007/BF00039382.
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Programmed translational frameshifting.程序性翻译移码
Microbiol Rev. 1996 Mar;60(1):103-34. doi: 10.1128/mr.60.1.103-134.1996.
6
Translational recoding induced by G-rich mRNA sequences that form unusual structures.由形成异常结构的富含鸟嘌呤的mRNA序列诱导的翻译重编码。
Cell. 1996 Sep 20;86(6):949-59. doi: 10.1016/s0092-8674(00)80170-1.
7
Frameshifting in the expression of the Escherichia coli trpR gene is modulated by translation initiation.大肠杆菌trpR基因表达中的移码受翻译起始调控。
J Bacteriol. 1993 May;175(10):3204-7. doi: 10.1128/jb.175.10.3204-3207.1993.
8
Alternative readings of the genetic code.遗传密码的其他解读方式。
Cell. 1993 Aug 27;74(4):591-6. doi: 10.1016/0092-8674(93)90507-m.
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Uninterrupted translation through putative 12-nucleotide coding gap in sequence of carA: business as usual.通过carA序列中假定的12个核苷酸编码间隙进行不间断翻译:一切照旧。
J Bacteriol. 1994 Jan;176(1):265-7. doi: 10.1128/jb.176.1.265-267.1994.
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A novel programed frameshift expresses the POL3 gene of retrotransposon Ty3 of yeast: frameshifting without tRNA slippage.一种新型的程序性移码表达酵母逆转录转座子Ty3的POL3基因:无tRNA滑动的移码。
Cell. 1993 Jul 16;74(1):93-103. doi: 10.1016/0092-8674(93)90297-4.