Sierks M R, Ford C, Reilly P J, Svensson B
Department of Chemical Engineering, Iowa State University, Ames 50011.
Protein Eng. 1993 Jan;6(1):75-9. doi: 10.1093/protein/6.1.75.
Fungal glucoamylases contain four conserved regions. One region from the Aspergillus niger enzyme contains three key carboxylic acid residues, the general acid catalytic group, Glu179, along with Asp176 and Glu180. Three site-directed mutations, Leu177-->His, Trp178-->Arg and Asn182-->Ala, were constructed near these acidic groups to reveal the function of other conserved residues in this region. Leu177 and Trp178 are strictly conserved among fungal glucoamylases, while an amide, predominantly Asn, always occurs at position 182. Substitutions of Leu177 or Trp178 cause significant decreases in kcat with the substrates tested. Similar increases in activation energies obtained with Leu177-->His with both alpha-(1,4)- and alpha-(1,6)-linked substrates indicate Leu177 is located in subsite 1. KM values obtained with the Trp178-->Arg mutation increase for an alpha-(1,6)-linked substrate, but not for alpha-(1,4)-linked substrates. Calculated differences in activation energy between substrates indicate Trp178 interacts specifically with subsite 2. The Asn182-->Ala mutation did not change kcat or KM values, indicating that Asn182 is not crucial for activity. These results support a mechanism for glucoamylase catalytic activity consisting of a fast substrate binding step followed by a conformational change at subsite 1 to stabilize the transition state complex.
真菌糖化酶含有四个保守区域。黑曲霉酶的一个区域包含三个关键羧酸残基,即广义酸催化基团Glu179,以及Asp176和Glu180。在这些酸性基团附近构建了三个定点突变,Leu177→His、Trp178→Arg和Asn182→Ala,以揭示该区域其他保守残基的功能。Leu177和Trp178在真菌糖化酶中严格保守,而在位置182处总是出现酰胺,主要是Asn。Leu177或Trp178的取代导致所测试底物的kcat显著降低。Leu177→His对α-(1,4)-和α-(1,6)-连接底物获得的活化能类似增加表明Leu177位于亚位点1。Trp178→Arg突变对α-(1,6)-连接底物获得的KM值增加,但对α-(1,4)-连接底物没有增加。底物之间计算的活化能差异表明Trp178与亚位点2特异性相互作用。Asn182→Ala突变没有改变kcat或KM值,表明Asn182对活性不是至关重要的。这些结果支持了一种糖化酶催化活性机制,该机制由快速底物结合步骤,随后是亚位点1的构象变化以稳定过渡态复合物组成。