Yáñez R J, Viñuela E
Centro de Biología Molecular (CSIC-UAM), Facultad de Ciencias, Campus de Cantoblanco, Madrid, Spain.
Virology. 1993 Mar;193(1):531-6. doi: 10.1006/viro.1993.1161.
Sequencing of the EcoRI N' fragment of African swine fever virus (ASFV) DNA revealed an open reading frame encoding a protein similar to ATP-dependent DNA ligases. When the gene encoding this protein was expressed in Escherichia coli, a protein of the expected molecular mass was labeled in bacterial extracts upon incubation with [alpha-32P]ATP. The recombinant protein comigrated in SDS-PAGE with the putative viral DNA ligase detected in extracts of infected cells. We demonstrate that the recombinant protein is a DNA ligase by dissociation of the protein-[32P]AMP adduct with pyrophosphate and nicked DNA. The putatively adenylylated lysine in ASFV is surrounded by two arginine residues, instead of by two hydrophobic amino acids as in the other ATP-dependent DNA ligases. This might explain the high concentration of pyrophosphate necessary to revert the DNA ligase--AMP adduct in ASFV, 10- to 100-fold higher than that required for other DNA ligases. A comparison of the amino acid sequences reported for ATP-dependent DNA ligases disclosed three new amino acid motifs around the adenylylation site of these enzymes. ASFV DNA ligase has little similarity to the other enzymes at the ends of the molecule, but conserves the amino acid motifs of the central region.
非洲猪瘟病毒(ASFV)DNA的EcoRI N'片段测序显示出一个开放阅读框,其编码一种与ATP依赖性DNA连接酶相似的蛋白质。当编码该蛋白质的基因在大肠杆菌中表达时,在用[α-32P]ATP孵育后,细菌提取物中标记出了预期分子量的蛋白质。重组蛋白在SDS-PAGE中的迁移情况与在感染细胞提取物中检测到的假定病毒DNA连接酶相同。我们通过用焦磷酸和带切口的DNA解离蛋白质-[32P]AMP加合物,证明该重组蛋白是一种DNA连接酶。ASFV中假定的腺苷酸化赖氨酸被两个精氨酸残基包围,而不像其他ATP依赖性DNA连接酶那样被两个疏水氨基酸包围。这可能解释了使ASFV中的DNA连接酶-AMP加合物逆转所需的高浓度焦磷酸,其比其他DNA连接酶所需的浓度高10至100倍。对已报道的ATP依赖性DNA连接酶的氨基酸序列进行比较,揭示了这些酶腺苷酸化位点周围的三个新氨基酸基序。ASFV DNA连接酶在分子末端与其他酶的相似性很小,但保留了中心区域的氨基酸基序。