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HLA - A基因座周围七个新基因的定位

Localization of seven new genes around the HLA-A locus.

作者信息

el Kahloun A, Chauvel B, Mauvieux V, Dorval I, Jouanolle A M, Gicquel I, Le Gall J Y, David V

机构信息

Laboratoire de Biochimie Médicale B, Faculté de Médecine, Rennes, France.

出版信息

Hum Mol Genet. 1993 Jan;2(1):55-60. doi: 10.1093/hmg/2.1.55.

DOI:10.1093/hmg/2.1.55
PMID:8490624
Abstract

A yeast artificial chromosome (YAC B30) with a 320 kb insert of genomic DNA which includes the HLA-A gene was used to screen a cDNA library of human duodenal mucosa. Seven cDNA clones were isolated which correspond to seven new non-HLA class I structural genes. These new genes are located within a region that may well contain the gene responsible for hemochromatosis and have therefore been named HCG I-VII (Hemochromatosis Candidate Gene). HCG I, III, V and VI are probably single copy genes, situated at 180, 155, 140 and 230 kb centromeric to HLA-A, respectively. HCG II, IV and VII present several copies: one copy of HCG II, one of HCG IV and one of HCG VII are centromeric to HLA-A (at 30, 70 and 100 kb respectively). Another copy of HCG IV is 20 kb telomeric to HLA-A. Each of the genes localized on the YAC B30 is associated with an CpG/HTF island.

摘要

一个带有包含HLA - A基因的320 kb基因组DNA插入片段的酵母人工染色体(YAC B30)被用于筛选人十二指肠黏膜的cDNA文库。分离出了七个cDNA克隆,它们对应于七个新的非HLA I类结构基因。这些新基因位于一个很可能包含血色素沉着症相关基因的区域内,因此被命名为HCG I - VII(血色素沉着症候选基因)。HCG I、III、V和VI可能是单拷贝基因,分别位于HLA - A着丝粒方向180、155、140和230 kb处。HCG II、IV和VII有多个拷贝:HCG II的一个拷贝、HCG IV的一个拷贝和HCG VII的一个拷贝位于HLA - A着丝粒方向(分别在30、70和100 kb处)。HCG IV的另一个拷贝位于HLA - A端粒方向20 kb处。定位在YAC B30上的每个基因都与一个CpG/HTF岛相关联。

相似文献

1
Localization of seven new genes around the HLA-A locus.HLA - A基因座周围七个新基因的定位
Hum Mol Genet. 1993 Jan;2(1):55-60. doi: 10.1093/hmg/2.1.55.
2
Isolation of novel non-HLA gene fragments from the hemochromatosis region (6p21.3) by cDNA hybridization selection.通过cDNA杂交筛选从血色素沉着病区域(6p21.3)分离新型非HLA基因片段。
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3
Localization of seven new genes around the HLA-A locus.
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4
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Anonymous markers located on chromosome 6 in the HLA-A class I region: allelic distribution in genetic haemochromatosis.位于HLA - A I类区域6号染色体上的匿名标记:遗传性血色素沉着症中的等位基因分布
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Cloning and physical mapping of the HLA class I region spanning the HLA-E-to-HLA-F interval by using yeast artificial chromosomes.利用酵母人工染色体对跨越HLA-E至HLA-F区间的HLA I类区域进行克隆和物理图谱绘制。
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Systematic sequencing of the human HLA-A/HLA-F region: establishment of a cosmid contig and identification of a new gene cluster within 37 kb of sequence.人类HLA - A/HLA - F区域的系统测序:构建黏粒重叠群并鉴定37 kb序列内的一个新基因簇。
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引用本文的文献

1
Haemochromatosis: a gene at last?血色素沉着症:终于找到相关基因了?
J Med Genet. 1997 Feb;34(2):148-51. doi: 10.1136/jmg.34.2.148.
2
Allelic association of microsatellites of 6p in Italian hemochromatosis patients.意大利血色素沉着症患者6号染色体短臂微卫星的等位基因关联
Hum Genet. 1996 Apr;97(4):476-81. doi: 10.1007/BF02267070.
3
Cloning of a human homologue of the mouse Tctex-5 gene within the MHC class I region.在主要组织相容性复合体I类区域内克隆小鼠Tctex - 5基因的人类同源物。
Immunogenetics. 1996;44(5):331-9. doi: 10.1007/BF02602777.
4
A new non-HLA multigene family associated with the PERB11 family within the MHC class I region.一个与MHC I类区域内PERB11家族相关的新的非HLA多基因家族。
Immunogenetics. 1996;44(4):259-67. doi: 10.1007/BF02602555.
5
Physical map of the HLA-A/HLA-F subregion and identification of two new coding sequences.HLA - A/HLA - F亚区域的物理图谱及两个新编码序列的鉴定
Immunogenetics. 1996;43(4):175-81. doi: 10.1007/BF00587297.
6
Linkage disequilibrium and extended haplotypes in the HLA-A to D6S105 region: implications for mapping the hemochromatosis gene (HFE).HLA-A至D6S105区域的连锁不平衡与扩展单倍型:对血色素沉着症基因(HFE)定位的意义
Hum Genet. 1996 Jan;97(1):103-13. doi: 10.1007/BF00218843.
7
Anonymous marker loci within 400 kb of HLA-A generate haplotypes in linkage disequilibrium with the hemochromatosis gene (HFE).位于HLA - A基因400 kb范围内的匿名标记基因座产生与血色素沉着症基因(HFE)处于连锁不平衡状态的单倍型。
Am J Hum Genet. 1994 Feb;54(2):252-63.
8
Isolation of novel non-HLA gene fragments from the hemochromatosis region (6p21.3) by cDNA hybridization selection.通过cDNA杂交筛选从血色素沉着病区域(6p21.3)分离新型非HLA基因片段。
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Genes in one megabase of the HLA class I region.HLA I类区域中一个百万碱基范围内的基因。
Proc Natl Acad Sci U S A. 1993 Dec 15;90(24):11870-4. doi: 10.1073/pnas.90.24.11870.
10
A cosmid library specific for human chromosome regions 6p21.3 and 6q27.一个针对人类染色体6p21.3和6q27区域的黏粒文库。
Mamm Genome. 1993 Sep;4(9):493-8. doi: 10.1007/BF00364783.