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来自远缘链球菌6715的scrA和scrB的序列分析。

Sequence analysis of scrA and scrB from Streptococcus sobrinus 6715.

作者信息

Chen Y Y, Lee L N, LeBlanc D J

机构信息

Department of Microbiology, University of Texas Health Science Center at San Antonio 78284-7758.

出版信息

Infect Immun. 1993 Jun;61(6):2602-10. doi: 10.1128/iai.61.6.2602-2610.1993.

Abstract

The complete nucleotide sequences of Streptococcus sobrinus 6715 scrA and scrB, which encode sucrose-specific enzyme II of the phosphoenolpyruvate-dependent phosphotransferase system and sucrose-6-phosphate hydrolase, respectively, have been determined. These two genes were transcribed divergently, and the initiation codons of the two open reading frames were 192 bp apart. The transcriptional initiation sites were determined by primer extension analysis, and the putative promoter regions of these two genes overlapped partially. The gene encoding enzyme IIScr, scrA, contained 1,896 nucleotides, and the molecular mass of the predicted protein was 66,529 Da. The hydropathy plot of the predicted amino acid sequence indicated that enzyme IIScr was a relatively hydrophobic protein. The gene encoding sucrose-6-phosphate hydrolase, scrB, contained 1,437 nucleotides. The molecular mass of the predicted protein was 54,501 Da, and the encoded enzyme was hydrophilic. The predicted amino acid sequences of the two open reading frames exhibited approximately 45 and 70% identity with those encoded by scrA and scrB, respectively, from Streptococcus mutans GS5. Homology also was observed between the N-terminal region of the S. sobrinus 6715 enzyme IIScr and other enzyme IIs specific for the glucopyranoside molecule, all of which generate glucopyranoside-6-phosphate during translocation and phosphorylation of the respective substrates. The sequence of the C-terminal domain of the S. sobrinus 6715 enzyme IIScr shared significant homology with enzyme IIIGlc from Escherichia coli and Salmonella typhimurium and with the C-terminal domain of enzyme IIBgl from E. coli, indicating that the two functional domains, enzyme IIScr and enzyme IIIScr, were covalently linked as a single polypeptide in S. sobrinus 6715. The deduced amino acid sequence of the gene product of S. sobrinus scrB shared strong homology with sucrase from Bacillus subtilis, Klebsiella pneumoniae, and Vibrio alginolyticus, suggesting conservation based on the physiological roles of these proteins.

摘要

已确定变形链球菌6715株的scrA和scrB的完整核苷酸序列,它们分别编码磷酸烯醇丙酮酸依赖性磷酸转移酶系统的蔗糖特异性酶II和蔗糖-6-磷酸水解酶。这两个基因呈反向转录,两个开放阅读框的起始密码子相距192 bp。通过引物延伸分析确定了转录起始位点,这两个基因的推定启动子区域部分重叠。编码酶IIScr的基因scrA包含1896个核苷酸,预测蛋白质的分子量为66529 Da。预测氨基酸序列的亲水性图谱表明酶IIScr是一种相对疏水的蛋白质。编码蔗糖-6-磷酸水解酶的基因scrB包含1437个核苷酸。预测蛋白质的分子量为54501 Da,编码的酶是亲水性的。两个开放阅读框的预测氨基酸序列分别与变形链球菌GS5的scrA和scrB编码的序列具有约45%和70%的同一性。在变形链球菌6715酶IIScr的N端区域与其他对吡喃葡萄糖苷分子特异的酶II之间也观察到同源性,所有这些酶在各自底物的转运和磷酸化过程中都产生吡喃葡萄糖苷-6-磷酸。变形链球菌6715酶IIScr的C端结构域序列与大肠杆菌和鼠伤寒沙门氏菌的酶IIIGlc以及大肠杆菌的酶IIBgl的C端结构域具有显著同源性,表明在变形链球菌6715中,两个功能结构域酶IIScr和酶IIIScr作为单个多肽共价连接。变形链球菌scrB基因产物的推导氨基酸序列与枯草芽孢杆菌、肺炎克雷伯菌和溶藻弧菌的蔗糖酶具有很强的同源性,表明基于这些蛋白质的生理作用存在保守性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e032/280890/f7b49785e2f7/iai00018-0347-a.jpg

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