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用原子力显微镜检测人染色体的原位杂交

Detection of in situ hybridization to human chromosomes with the atomic force microscope.

作者信息

Putman C A, De Grooth B G, Wiegant J, Raap A K, Van der Werf K O, Van Hulst N F, Greve J

机构信息

Department of Applied Physics, University of Twente, Enschede, The Netherlands.

出版信息

Cytometry. 1993;14(4):356-61. doi: 10.1002/cyto.990140403.

DOI:10.1002/cyto.990140403
PMID:8513692
Abstract

Atomic force microscopy (AFM) permits one to generate a topographic representation of the sample under investigation with high spatial resolution. We assumed that cytochemical staining techniques, which yield reaction products which can be discriminated from the surrounding material on basis of their topographic properties, would be applicable in AFM. Here we show the validity of this assumption by employing an in situ hybridization technique in which the final label was the precipitated product of a peroxidase/diaminebenzidine reaction. After hybridization of the DNA probe pUC1.77 that recognizes the heterochromatic region of human chromosome 1 (1q12), the AFM clearly detects the sites of in situ hybridization. In situ hybridization with DNA probe p1-79 results in clear marking of the telomere region 1p36. The diameter of the probe p1-79 linked reaction product was 75-100 nm, indicating that resolution of 200 nm can readily be reached with this AFM approach of DNA mapping. This precision is directly linked with the amount of precipitated material.

摘要

原子力显微镜(AFM)能够以高空间分辨率生成被研究样品的形貌图。我们推测,那些能产生可根据其形貌特性与周围物质区分开来的反应产物的细胞化学染色技术,在AFM中是适用的。在此,我们通过采用一种原位杂交技术来证明这一推测的正确性,该技术中最终的标记物是过氧化物酶/二氨基联苯胺反应的沉淀产物。在识别人类染色体1(1q12)异染色质区域的DNA探针pUC1.77杂交后,AFM能清晰地检测到原位杂交位点。用DNA探针p1 - 79进行原位杂交可清晰标记端粒区域1p36。与探针p1 - 79相连的反应产物的直径为75 - 100纳米,这表明通过这种AFM DNA测绘方法很容易达到200纳米的分辨率。这种精度与沉淀物质的量直接相关。

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Detection of in situ hybridization to human chromosomes with the atomic force microscope.用原子力显微镜检测人染色体的原位杂交
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2
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引用本文的文献

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Atomic force microscopy and scanning near-field optical microscopy studies on the characterization of human metaphase chromosomes.原子力显微镜和扫描近场光学显微镜对人类中期染色体特征的研究。
Eur Biophys J. 2003 Nov;32(7):620-7. doi: 10.1007/s00249-003-0309-8. Epub 2003 Jul 9.
2
Analysis by atomic force microscopy of morphological changes in barley chromosomes during FISH treatment.利用原子力显微镜分析大麦染色体在荧光原位杂交(FISH)处理过程中的形态变化。
Chromosome Res. 2003;11(1):65-71. doi: 10.1023/a:1022062100358.
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Atomic force microscopy: application to investigation of Escherichia coli morphology before and after exposure to cefodizime.
原子力显微镜:应用于研究大肠杆菌在暴露于头孢地嗪前后的形态。
Antimicrob Agents Chemother. 1998 Jan;42(1):18-22. doi: 10.1128/AAC.42.1.18.
4
Cytochemical detection systems for in situ hybridization, and the combination with immunocytochemistry, 'who is still afraid of red, green and blue?'.用于原位杂交的细胞化学检测系统,以及与免疫细胞化学的结合,“谁还怕红、绿、蓝?”
Histochem J. 1995 Nov;27(11):833-58.
5
Atomic force microscopy of mammalian sperm chromatin.哺乳动物精子染色质的原子力显微镜检查
Chromosoma. 1993 Nov;102(9):623-30. doi: 10.1007/BF00352310.
6
Probing chromatin with the scanning force microscope.用扫描力显微镜探测染色质。
Chromosoma. 1994 Jul;103(4):231-6. doi: 10.1007/BF00352247.
7
Laser scanning confocal microscopy and quantitative microscopy with a charge coupled device camera improve detection of human papillomavirus DNA revealed by fluorescence in situ hybridization.激光扫描共聚焦显微镜和带有电荷耦合器件相机的定量显微镜可提高通过荧光原位杂交检测人乳头瘤病毒DNA的能力。
Histochemistry. 1994 Apr;101(4):303-10. doi: 10.1007/BF00315918.