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用扫描力显微镜探测染色质。

Probing chromatin with the scanning force microscope.

作者信息

Fritzsche W, Schaper A, Jovin T M

机构信息

Department of Molecular Biology, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany.

出版信息

Chromosoma. 1994 Jul;103(4):231-6. doi: 10.1007/BF00352247.

DOI:10.1007/BF00352247
PMID:7988284
Abstract

With the scanning force microscope (SFM), one can image the topography of biological material adsorbed at air-solid or liquid-solid interfaces with up to nanometer resolution. In principle, fixation, contrast enhancement, and labeling are not required. We have adapted specimen preparation techniques of conventional electron microscopy for visualizing chromatin ultrastructures in the SFM. A beaded substructure of the nucleoprotein filament was obtained after hypotonic lysis of chicken erythrocytes and air drying. The beads-on-a-string morphology of the basic nucleosomal assembly was well delineated. The nucleosomes appeared as round protrusions with an apparent height of 4-6 nm. The histogram of center-to-center distances between adjacent nucleosome cores along the filament axis had a peak at approximately 30 nm. Reversible changes in the three-dimensional structure were observed upon exposure of air-dried samples of metaphase chromosomes to solutions of different ionic strengths.

摘要

使用扫描力显微镜(SFM),可以对吸附在气-固或液-固界面的生物材料的形貌进行成像,分辨率可达纳米级。原则上,不需要固定、增强对比度和标记。我们采用了传统电子显微镜的标本制备技术来在SFM中观察染色质超微结构。鸡红细胞经低渗裂解和空气干燥后,获得了核蛋白丝的串珠状亚结构。基本核小体组装的串珠形态得到了很好的描绘。核小体表现为明显高度为4-6纳米的圆形突起。沿细丝轴相邻核小体核心之间的中心距直方图在约30纳米处有一个峰值。将中期染色体的空气干燥样品暴露于不同离子强度的溶液中时,观察到三维结构的可逆变化。

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Probing chromatin with the scanning force microscope.用扫描力显微镜探测染色质。
Chromosoma. 1994 Jul;103(4):231-6. doi: 10.1007/BF00352247.
2
Scanning force microscopy of chromatin fibers in air and in liquid.空气中和液体中染色质纤维的扫描力显微镜观察
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DNA release dynamics from reducible polyplexes by atomic force microscopy.通过原子力显微镜观察可还原多聚体的DNA释放动力学
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2
Atomic force microscopy for imaging human metaphase chromosomes.用于对人类中期染色体进行成像的原子力显微镜
Chromosome Res. 2008;16(3):383-96. doi: 10.1007/s10577-008-1241-7.
3
CHRONIS: an animal chromosome image database.CHRONIS:一个动物染色体图像数据库。

本文引用的文献

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Chromosome fibers from an interphase nucleus.来自间期细胞核的染色体纤维。
Science. 1963 Jan 11;139(3550):120-1. doi: 10.1126/science.139.3550.120.
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Atomic force microscope.原子力显微镜
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Detection of in situ hybridization to human chromosomes with the atomic force microscope.用原子力显微镜检测人染色体的原位杂交
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Conformation of reconstituted mononucleosomes and effect of linker histone H1 binding studied by scanning force microscopy.通过扫描力显微镜研究重组单核小体的构象及连接组蛋白H1结合的影响。
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Determination of preferential binding sites for anti-dsRNA antibodies on double-stranded RNA by scanning force microscopy.通过扫描力显微镜确定抗双链RNA抗体在双链RNA上的优先结合位点。
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Probing the Saccharomyces cerevisiae centromeric DNA (CEN DNA)-binding factor 3 (CBF3) kinetochore complex by using atomic force microscopy.利用原子力显微镜探究酿酒酵母着丝粒DNA(CEN DNA)结合因子3(CBF3)动粒复合体。
Proc Natl Acad Sci U S A. 1999 Mar 30;96(7):3757-62. doi: 10.1073/pnas.96.7.3757.
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Visualization of trp repressor and its complexes with DNA by atomic force microscopy.通过原子力显微镜观察色氨酸阻遏物及其与DNA的复合物。
Biophys J. 1998 Dec;75(6):2712-20. doi: 10.1016/S0006-3495(98)77715-X.
9
Scanning force microscopy reveals ellipsoid shape of chicken erythrocyte nucleosomes.扫描力显微镜揭示了鸡红细胞核小体的椭圆形形状。
Biophys J. 1996 Oct;71(4):2222-6. doi: 10.1016/S0006-3495(96)79423-7.
10
Imaging ROMK1 inwardly rectifying ATP-sensitive K+ channel protein using atomic force microscopy.使用原子力显微镜对内向整流型ATP敏感性钾离子通道蛋白ROMK1进行成像。
Proc Natl Acad Sci U S A. 1996 Aug 6;93(16):8756-60. doi: 10.1073/pnas.93.16.8756.
Cytometry. 1993;14(4):356-61. doi: 10.1002/cyto.990140403.
4
Analysis of banded human chromosomes and in situ hybridization patterns by scanning force microscopy.通过扫描力显微镜对带型人类染色体和原位杂交模式进行分析。
Proc Natl Acad Sci U S A. 1993 Mar 15;90(6):2509-11. doi: 10.1073/pnas.90.6.2509.
5
Atomic force microscope measurements of nucleosome cores assembled along defined DNA sequences.沿特定DNA序列组装的核小体核心的原子力显微镜测量。
Biochemistry. 1993 Aug 24;32(33):8390-6. doi: 10.1021/bi00084a002.
6
Identification of the elemental packing unit of DNA in mammalian sperm cells by atomic force microscopy.利用原子力显微镜鉴定哺乳动物精子细胞中DNA的基本包装单元
Biochem Biophys Res Commun. 1993 Jun 30;193(3):1347-54. doi: 10.1006/bbrc.1993.1773.
7
Atomic force microscopy of mammalian sperm chromatin.哺乳动物精子染色质的原子力显微镜检查
Chromosoma. 1993 Nov;102(9):623-30. doi: 10.1007/BF00352310.
8
Scanning force microscopy of circular and linear plasmid DNA spread on mica with a quaternary ammonium salt.用季铵盐在云母上展开的环状和线性质粒DNA的扫描力显微镜观察。
Nucleic Acids Res. 1993 Dec 25;21(25):6004-9. doi: 10.1093/nar/21.25.6004.
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Reversible in vitro packing of nucleosomal filaments into globular supranucleosomal units in chromatin of whole chick erythrocyte nuclei.在整个鸡红细胞细胞核的染色质中,核小体细丝可逆地体外包装成球状超核小体单位。
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Unravelled nucleosomes, nucleosome beads and higher order structures of chromatin: influence of non-histone components and histone H1.解开的核小体、核小体串珠及染色质的高级结构:非组蛋白成分和组蛋白H1的影响
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