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三甲基膦与马心脏肌红蛋白和抹香鲸肌红蛋白的结合。血红素口袋的动力学、质子磁共振归属及核Overhauser效应研究。

Trimethylphosphine binding to horse-heart and sperm-whale myoglobins. Kinetics, proton magnetic resonance assignment and nuclear Overhauser effect investigation of the heme pocket.

作者信息

Brunel C, Bondon A, Simonneaux G

机构信息

Laboratoire de Chimie Organométallique et Biologique, URA CNRS 415, Université de Rennes, France.

出版信息

Eur J Biochem. 1993 Jun 1;214(2):405-14. doi: 10.1111/j.1432-1033.1993.tb17936.x.

Abstract

Two-dimensional nuclear magnetic resonance techniques have been used to assign resonances corresponding to the heme pocket and several other residues of horse heart and sperm whale myoglobins ligated by trimethylphosphine. The assignment procedure was based mainly on the nuclear Overhauser effect connectivities with the ligand and the heme substituents. For quantitative measurements of Overhauser effects, application of truncated driven techniques between a proton from distal residues and methyl groups from the ligand was used to determine internuclear distances. These new results have permitted us to map the heme pockets and to investigate the conformational differences in the heme pockets between horse heart and sperm whale myoglobins. The interproton distances between distal amino acid residues and trimethylphosphine were found to be longer in horse heart myoglobin relative to those in sperm whale myoglobin. This result suggests that the size of the heme pocket is larger in horse heart myoglobin. Association and dissociation rate constants were measured for trimethylphosphine binding to myoglobins. Both values were four times larger for horse heart myoglobin than those for sperm whale myoglobin. This observation confirms the structural results obtained with NMR studies and is rationalized by a greater stabilization of a larger pocket in horse heart myoglobin relative to sperm whale myoglobin.

摘要

二维核磁共振技术已被用于确定与马心脏肌红蛋白和抹香鲸肌红蛋白的血红素口袋以及其他几个被三甲基膦配位的残基相对应的共振峰。归属过程主要基于与配体和血红素取代基的核Overhauser效应连接性。为了对Overhauser效应进行定量测量,在来自远端残基的质子和来自配体的甲基之间应用截断驱动技术来确定核间距离。这些新结果使我们能够绘制出血红素口袋,并研究马心脏肌红蛋白和抹香鲸肌红蛋白之间血红素口袋的构象差异。发现马心脏肌红蛋白中远端氨基酸残基与三甲基膦之间的质子间距离相对于抹香鲸肌红蛋白中的距离更长。这一结果表明马心脏肌红蛋白中血红素口袋的尺寸更大。测量了三甲基膦与肌红蛋白结合的缔合和解离速率常数。马心脏肌红蛋白的这两个值均比抹香鲸肌红蛋白的大四倍。这一观察结果证实了通过核磁共振研究获得的结构结果,并通过马心脏肌红蛋白相对于抹香鲸肌红蛋白中更大口袋的更大稳定性来解释。

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