De Sanctis Giampiero, Petrella Giovanni, Ciaccio Chiara, Feis Alessandro, Smulevich Giulietta, Coletta Massimo
Department of Molecular, Cellular and Animal Biology, University of Camerino, I-62032 Camerino (MC), Italy.
Biophys J. 2007 Sep 15;93(6):2135-42. doi: 10.1529/biophysj.106.098764. Epub 2007 May 11.
The absorption and resonance Raman spectra and the azide binding kinetics of ferric horse heart myoglobin (Mb) and mini myoglobin (a chemically truncated form of horse heart Mb containing residues 32-139) have been compared. The steady-state spectra show that an additional six-coordinated low-spin form (not present in entire horse heart Mb, which is purely six-coordinated high spin) predominates in mini Mb. The distal histidine is possibly the sixth ligand in this species. The presence of two species corresponds to a kinetic biphasicity for mini Mb that is not observed for horse heart Mb. Azide binds to horse heart Mb much more slowly than to sperm whale Mb. This difference may result from a sterically hindered distal pocket in horse heart Mb. In both cases, the rate constants level off at high azide concentrations, implying the existence of a rate-limiting step (likely referable to the dissociation of the axial sixth ligand). The faster rate constant of mini Mb is similar to that of sperm whale Mb, whereas the slower one is similar to that of entire horse heart Mb.
已对铁马心肌红蛋白(Mb)和微型肌红蛋白(马心Mb的一种化学截短形式,包含32 - 139位残基)的吸收光谱、共振拉曼光谱以及叠氮化物结合动力学进行了比较。稳态光谱表明,在微型肌红蛋白中,一种额外的六配位低自旋形式(在完整的马心肌红蛋白中不存在,其完全是六配位高自旋)占主导。远端组氨酸可能是该物种中的第六个配体。两种形式的存在对应于微型肌红蛋白的动力学双相性,而马心肌红蛋白未观察到这种情况。叠氮化物与马心肌红蛋白的结合比与抹香鲸肌红蛋白的结合慢得多。这种差异可能是由于马心肌红蛋白的远端口袋存在空间位阻。在这两种情况下,速率常数在高叠氮化物浓度下趋于平稳,这意味着存在一个限速步骤(可能与轴向第六个配体的解离有关)。微型肌红蛋白较快的速率常数与抹香鲸肌红蛋白的相似,而较慢的速率常数与完整的马心肌红蛋白的相似。