• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

大肠杆菌甲硫氨酰-tRNA合成酶锌结合结构域的定位

Mapping of the zinc binding domain of Escherichia coli methionyl-tRNA synthetase.

作者信息

Fourmy D, Meinnel T, Mechulam Y, Blanquet S

机构信息

Unité de Recherche Associée 240 du Centre National de la Recherche Scientifique Ecole Polytechnique, Palaiseau, France.

出版信息

J Mol Biol. 1993 Jun 20;231(4):1068-77. doi: 10.1006/jmbi.1993.1352.

DOI:10.1006/jmbi.1993.1352
PMID:8515465
Abstract

Cys/His motifs, found in several nucleic acid binding proteins, generally correspond to sites for the binding of metal atoms. Such a motif, comprising four Cys residues, occurs in the subunits of Escherichia coli methionyl-tRNA synthetase, a dimeric enzyme known to bind two zinc atoms. In this study, each of the four cysteines in the cysteine cluster (region 145 to 161) of E. coli methionyl-tRNA synthetase were successively changed into an alanine. Either substitution is sufficient to destabilize the tight binding of the zinc ion. Moreover, a peptide having a sequence corresponding to that of the 138 to 163 region of methionyl-tRNA synthetase has been prepared. It strongly binds one zinc atom, even in the presence of ethylene diamine tetraacetate. These data establish that, in methionyl-tRNA synthetase, the Cys motif of region 145 to 161 is actually the binding site for zinc. In addition, the mutation of each cysteine modifies the parameters of the methionine activation reaction, and appears to change the structure of the enzyme, as probed by an increased sensitivity of the mutant enzymes to trypsin attack. The possible role of the zinc atom and of its chelating residues in the folding of the active centre of methionyl-tRNA synthetase is discussed.

摘要

在几种核酸结合蛋白中发现的半胱氨酸/组氨酸基序通常对应于金属原子的结合位点。这种由四个半胱氨酸残基组成的基序存在于大肠杆菌甲硫氨酰 - tRNA合成酶的亚基中,该二聚体酶已知能结合两个锌原子。在本研究中,大肠杆菌甲硫氨酰 - tRNA合成酶半胱氨酸簇(区域145至161)中的四个半胱氨酸中的每一个都依次被替换为丙氨酸。任何一种替换都足以破坏锌离子的紧密结合。此外,已经制备了一种具有与甲硫氨酰 - tRNA合成酶138至163区域序列相对应的肽。即使在存在乙二胺四乙酸的情况下,它也能强烈结合一个锌原子。这些数据表明,在甲硫氨酰 - tRNA合成酶中,145至161区域的半胱氨酸基序实际上是锌的结合位点。此外,每个半胱氨酸的突变改变了甲硫氨酸活化反应的参数,并且似乎改变了酶的结构,这通过突变酶对胰蛋白酶攻击的敏感性增加来探测。讨论了锌原子及其螯合残基在甲硫氨酰 - tRNA合成酶活性中心折叠中的可能作用。

相似文献

1
Mapping of the zinc binding domain of Escherichia coli methionyl-tRNA synthetase.大肠杆菌甲硫氨酰-tRNA合成酶锌结合结构域的定位
J Mol Biol. 1993 Jun 20;231(4):1068-77. doi: 10.1006/jmbi.1993.1352.
2
Methionyl-tRNA synthetase zinc binding domain. Three-dimensional structure and homology with rubredoxin and gag retroviral proteins.甲硫氨酰 - tRNA合成酶锌结合结构域。三维结构以及与铁氧化还原蛋白和gag逆转录病毒蛋白的同源性。
J Mol Biol. 1993 Jun 20;231(4):1078-89. doi: 10.1006/jmbi.1993.1353.
3
Metal-binding site in a class I tRNA synthetase localized to a cysteine cluster inserted into nucleotide-binding fold.I类tRNA合成酶中的金属结合位点定位于插入核苷酸结合结构域的半胱氨酸簇。
Proc Natl Acad Sci U S A. 1993 Mar 15;90(6):2261-5. doi: 10.1073/pnas.90.6.2261.
4
Evidence for distinct locations for metal binding sites in two closely related class I tRNA synthetases.两个密切相关的I类tRNA合成酶中金属结合位点不同位置的证据。
J Biomol Struct Dyn. 1993 Dec;11(3):571-81. doi: 10.1080/07391102.1993.10508016.
5
Methionyl-tRNA synthetase needs an intact and mobile 332KMSKS336 motif in catalysis of methionyl adenylate formation.甲硫氨酰 - tRNA合成酶在催化甲硫氨酰腺苷酸形成过程中需要完整且可移动的332KMSKS336基序。
J Mol Biol. 1994 Sep 30;242(4):566-76. doi: 10.1006/jmbi.1994.1601.
6
Two acidic residues of Escherichia coli methionyl-tRNA synthetase act as negative discriminants towards the binding of non-cognate tRNA anticodons.大肠杆菌甲硫氨酰 - tRNA合成酶的两个酸性残基对非同源tRNA反密码子的结合起到负向判别作用。
J Mol Biol. 1993 Oct 20;233(4):615-28. doi: 10.1006/jmbi.1993.1540.
7
Crystal structure of Escherichia coli methionyl-tRNA synthetase highlights species-specific features.
J Mol Biol. 1999 Dec 17;294(5):1287-97. doi: 10.1006/jmbi.1999.3339.
8
Crystallographic study at 2.5 A resolution of the interaction of methionyl-tRNA synthetase from Escherichia coli with ATP.大肠杆菌甲硫氨酰 - tRNA合成酶与ATP相互作用的2.5埃分辨率晶体学研究。
J Mol Biol. 1990 Nov 20;216(2):411-24. doi: 10.1016/S0022-2836(05)80331-6.
9
Mutation of the carboxy terminal zinc finger of E. coli isoleucyl-tRNA synthetase alters zinc binding and aminoacylation activity.大肠杆菌异亮氨酰 - tRNA合成酶羧基末端锌指的突变会改变锌结合和氨酰化活性。
Biochem Biophys Res Commun. 1995 Nov 13;216(2):648-54. doi: 10.1006/bbrc.1995.2671.
10
Yeast cytoplasmic and mitochondrial methionyl-tRNA synthetases: two structural frameworks for identical functions.酵母细胞质和线粒体甲硫氨酰 - tRNA合成酶:相同功能的两种结构框架。
J Mol Biol. 2001 Aug 3;311(1):205-16. doi: 10.1006/jmbi.2001.4844.

引用本文的文献

1
Identification and Characterization of a Chemical Compound that Inhibits Methionyl-tRNA Synthetase from Pseudomonas aeruginosa.一种抑制铜绿假单胞菌甲硫氨酰 - tRNA合成酶的化合物的鉴定与表征
Curr Drug Discov Technol. 2017;14(3):156-168. doi: 10.2174/1570163814666170330100238.
2
Evidence for late resolution of the aux codon box in evolution.证据表明,辅助密码子盒在进化中晚期得到解决。
J Biol Chem. 2013 Jul 5;288(27):19625-32. doi: 10.1074/jbc.M112.449249. Epub 2013 May 21.
3
Time line of redox events in aging postmitotic cells.
衰老的有丝分裂后细胞中氧化还原事件的时间线。
Elife. 2013 Feb 5;2:e00306. doi: 10.7554/eLife.00306.
4
tRNA dynamics on the ribosome during translation.翻译过程中核糖体上的转运RNA动态变化
Proc Natl Acad Sci U S A. 2004 Aug 31;101(35):12893-8. doi: 10.1073/pnas.0403884101. Epub 2004 Aug 18.
5
Covalent methionylation of Escherichia coli methionyl-tRNA synthethase: identification of the labeled amino acid residues by matrix-assisted laser desorption-ionization mass spectrometry.大肠杆菌甲硫氨酰 - tRNA合成酶的共价甲硫基化:通过基质辅助激光解吸电离质谱法鉴定标记的氨基酸残基
Protein Sci. 1997 Nov;6(11):2426-35. doi: 10.1002/pro.5560061116.
6
Crystal structure at 1.2 A resolution and active site mapping of Escherichia coli peptidyl-tRNA hydrolase.大肠杆菌肽基 - tRNA水解酶的1.2埃分辨率晶体结构及活性位点图谱
EMBO J. 1997 Aug 1;16(15):4760-9. doi: 10.1093/emboj/16.15.4760.
7
Adenosine conformations of nucleotides bound to methionyl tRNA synthetase by transferred nuclear Overhauser effect spectroscopy.通过转移核Overhauser效应光谱法研究与甲硫氨酰tRNA合成酶结合的核苷酸的腺苷构象。
Biophys J. 1997 May;72(5):2275-84. doi: 10.1016/S0006-3495(97)78872-6.
8
Transition state stabilization by the 'high' motif of class I aminoacyl-tRNA synthetases: the case of Escherichia coli methionyl-tRNA synthetase.I类氨酰-tRNA合成酶“高位”基序对过渡态的稳定作用:以大肠杆菌甲硫氨酰-tRNA合成酶为例
Nucleic Acids Res. 1995 Dec 11;23(23):4793-8. doi: 10.1093/nar/23.23.4793.