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通过侧链官能团的化学修饰确定的肽结合域。

Peptide binding domains determined through chemical modification of the side-chain functional groups.

作者信息

Blondelle S E, Pérez-Payá E, Allicotti G, Forood B, Houghten R A

机构信息

Torrey Pines Institute for Molecular Studies, San Diego, California 92121, USA.

出版信息

Biophys J. 1995 Aug;69(2):604-11. doi: 10.1016/S0006-3495(95)79934-9.

DOI:10.1016/S0006-3495(95)79934-9
PMID:8527675
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1236286/
Abstract

A clear understanding of the specific secondary structure and binding domain resulting from the interactions of proteins and peptides with lipid surfaces will provide insight into the specific functions of biologically active molecules. We have shown in earlier studies that the stationary phases used in reverse-phase high-performance liquid chromatography represent a model artificial lipid surface for the study of induced conformational states of peptides on lipid interaction. We have now used reverse-phase high-performance liquid chromatography to determine the binding domains of peptides and, by extension, of proteins to a lipid surface. This approach consists of performing chemical modifications of specific amino acid side-chain functionalities after the interaction of the peptides with the reverse-phase high-performance liquid chromatography C18 groups. The susceptibility to oxidation was also studied after binding of the same peptides to liposomes. Oxidation of a single methionine residue "walked" through an amphipathic alpha-helical 18-mer peptide was selected to illustrate this approach. The extent of oxidation was found to be clearly dictated by the accessibility of the methionine residue to the aqueous mobile phase. The binding domain found for the peptide in its lipid-induced conformational state was unequivocally the entire hydrophobic face of the amphipathic alpha-helix.

摘要

清楚了解蛋白质和肽与脂质表面相互作用所产生的特定二级结构和结合域,将有助于深入了解生物活性分子的特定功能。我们在早期研究中表明,反相高效液相色谱中使用的固定相代表了一种模型人工脂质表面,用于研究肽在脂质相互作用时诱导的构象状态。我们现在已使用反相高效液相色谱来确定肽以及由此推广到蛋白质与脂质表面的结合域。该方法包括在肽与反相高效液相色谱C18基团相互作用后,对特定氨基酸侧链官能团进行化学修饰。在相同肽与脂质体结合后,还研究了其氧化敏感性。选择对一条两亲性α-螺旋18聚体肽中单个甲硫氨酸残基的氧化“游走”情况进行研究,以说明该方法。发现氧化程度明显取决于甲硫氨酸残基与水相流动相的可及性。在脂质诱导的构象状态下,该肽的结合域明确为两亲性α-螺旋的整个疏水表面。

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Peptide binding domains determined through chemical modification of the side-chain functional groups.通过侧链官能团的化学修饰确定的肽结合域。
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本文引用的文献

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Effect of the alpha-amino group on peptide retention behaviour in reversed-phase chromatography. Determination of the pK(a) values of the alpha-amino group of 19 different N-terminal amino acid residues.α-氨基对反相色谱中肽保留行为的影响。19种不同N端氨基酸残基α-氨基pK(a)值的测定。
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Reversed-phase liquid chromatography as a useful probe of hydrophobic interactions involved in protein folding and protein stability.反相液相色谱作为研究蛋白质折叠和蛋白质稳定性中疏水相互作用的有用探针。
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Reversed-phase chromatography of synthetic amphipathic alpha-helical peptides as a model for ligand/receptor interactions. Effect of changing hydrophobic environment on the relative hydrophilicity/hydrophobicity of amino acid side-chains.合成两亲性α-螺旋肽的反相色谱法作为配体/受体相互作用的模型。改变疏水环境对氨基酸侧链相对亲水性/疏水性的影响。
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Effect of charged residue substitutions on the membrane-interactive properties of signal sequences of the Escherichia coli LamB protein.带电残基取代对大肠杆菌LamB蛋白信号序列膜相互作用特性的影响。
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Induced conformational states of amphipathic peptides in aqueous/lipid environments.两亲性肽在水相/脂质环境中的诱导构象状态。
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Interaction of ricin and its constituent polypeptides with dipalmitoylphosphatidylcholine vesicles.蓖麻毒素及其组成多肽与二棕榈酰磷脂酰胆碱囊泡的相互作用。
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Prediction of protein antigenic determinants from amino acid sequences.从氨基酸序列预测蛋白质抗原决定簇。
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