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1
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Environ Health Perspect. 1995 Jun;103 Suppl 5(Suppl 5):21-3. doi: 10.1289/ehp.95103s421.
2
Highly conserved coding sequences in polychlorinated biphenyl (PCB)-degraders of Pseudomonas pseudoalcaligenes KF707 and Pseudomonas putida KF715.嗜碱假单胞菌KF707和恶臭假单胞菌KF715中多氯联苯(PCB)降解菌的高度保守编码序列。
Nucleic Acids Symp Ser. 1991(25):115-6.
3
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4
Gene components responsible for discrete substrate specificity in the metabolism of biphenyl (bph operon) and toluene (tod operon).负责联苯代谢(bph操纵子)和甲苯代谢(tod操纵子)中离散底物特异性的基因组件。
J Bacteriol. 1993 Aug;175(16):5224-32. doi: 10.1128/jb.175.16.5224-5232.1993.
5
Molecular relationship of chromosomal genes encoding biphenyl/polychlorinated biphenyl catabolism: some soil bacteria possess a highly conserved bph operon.编码联苯/多氯联苯分解代谢的染色体基因的分子关系:一些土壤细菌拥有高度保守的bph操纵子。
J Bacteriol. 1989 Oct;171(10):5467-72. doi: 10.1128/jb.171.10.5467-5472.1989.
6
Gene-specific transposon mutagenesis of the biphenyl/polychlorinated biphenyl-degradation-controlling bph operon in soil bacteria.土壤细菌中控制联苯/多氯联苯降解的bph操纵子的基因特异性转座子诱变
Gene. 1991 Feb 1;98(1):21-8. doi: 10.1016/0378-1119(91)90099-w.
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Cloning of a gene cluster encoding biphenyl and chlorobiphenyl degradation in Pseudomonas pseudoalcaligenes.编码假产碱假单胞菌中联苯和氯联苯降解的基因簇的克隆
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Functional analyses of a variety of chimeric dioxygenases constructed from two biphenyl dioxygenases that are similar structurally but different functionally.对由两种结构相似但功能不同的联苯双加氧酶构建的多种嵌合双加氧酶进行功能分析。
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Nucleotide sequence and functional analysis of the meta-cleavage pathway involved in biphenyl and polychlorinated biphenyl degradation in Pseudomonas sp. strain KKS102.假单胞菌属菌株KKS102中参与联苯和多氯联苯降解的间位裂解途径的核苷酸序列及功能分析
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Analysis of bph operon from the polychlorinated biphenyl-degrading strain of Pseudomonas pseudoalcaligenes KF707.
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Use of ecotoxicological tools to evaluate the health of New Bedford Harbor sediments: a microbial biomarker approach.使用生态毒理学工具评估新贝德福德港沉积物的健康状况:一种微生物生物标志物方法。
Environ Health Perspect. 2005 Feb;113(2):186-91. doi: 10.1289/ehp.6934.

本文引用的文献

1
Polychlorinated biphenyl dechlorination in aquatic sediments.多氯联苯在水沉积物中的脱氯作用。
Science. 1987 May 8;236(4802):709-12. doi: 10.1126/science.236.4802.709.
2
Gene components responsible for discrete substrate specificity in the metabolism of biphenyl (bph operon) and toluene (tod operon).负责联苯代谢(bph操纵子)和甲苯代谢(tod操纵子)中离散底物特异性的基因组件。
J Bacteriol. 1993 Aug;175(16):5224-32. doi: 10.1128/jb.175.16.5224-5232.1993.
3
Construction of hybrid biphenyl (bph) and toluene (tod) genes for functional analysis of aromatic ring dioxygenases.构建用于芳香环双加氧酶功能分析的杂合联苯(bph)和甲苯(tod)基因。
Gene. 1994 Jan 28;138(1-2):27-33. doi: 10.1016/0378-1119(94)90779-x.
4
Nucleotide sequence and functional analysis of the meta-cleavage pathway involved in biphenyl and polychlorinated biphenyl degradation in Pseudomonas sp. strain KKS102.假单胞菌属菌株KKS102中参与联苯和多氯联苯降解的间位裂解途径的核苷酸序列及功能分析
J Bacteriol. 1994 Jul;176(14):4269-76. doi: 10.1128/jb.176.14.4269-4276.1994.
5
Evidence for novel mechanisms of polychlorinated biphenyl metabolism in Alcaligenes eutrophus H850.产碱杆菌H850中多氯联苯代谢新机制的证据。
Appl Environ Microbiol. 1987 May;53(5):1103-12. doi: 10.1128/aem.53.5.1103-1112.1987.
6
Cloning of a gene cluster encoding biphenyl and chlorobiphenyl degradation in Pseudomonas pseudoalcaligenes.编码假产碱假单胞菌中联苯和氯联苯降解的基因簇的克隆
J Bacteriol. 1986 May;166(2):392-8. doi: 10.1128/jb.166.2.392-398.1986.
7
Toluene degradation by Pseudomonas putida F1. Nucleotide sequence of the todC1C2BADE genes and their expression in Escherichia coli.恶臭假单胞菌F1对甲苯的降解。todC1C2BADE基因的核苷酸序列及其在大肠杆菌中的表达。
J Biol Chem. 1989 Sep 5;264(25):14940-6.
8
Molecular relationship of chromosomal genes encoding biphenyl/polychlorinated biphenyl catabolism: some soil bacteria possess a highly conserved bph operon.编码联苯/多氯联苯分解代谢的染色体基因的分子关系:一些土壤细菌拥有高度保守的bph操纵子。
J Bacteriol. 1989 Oct;171(10):5467-72. doi: 10.1128/jb.171.10.5467-5472.1989.
9
Gene-specific transposon mutagenesis of the biphenyl/polychlorinated biphenyl-degradation-controlling bph operon in soil bacteria.土壤细菌中控制联苯/多氯联苯降解的bph操纵子的基因特异性转座子诱变
Gene. 1991 Feb 1;98(1):21-8. doi: 10.1016/0378-1119(91)90099-w.
10
Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600.假单胞菌属CF600菌株完整苯酚/3,4-二甲基苯酚分解代谢途径的核苷酸序列及功能分析
J Bacteriol. 1992 Feb;174(3):711-24. doi: 10.1128/jb.174.3.711-724.1992.

多氯联苯代谢的生物化学与遗传学

Biochemistry and genetics of PCB metabolism.

作者信息

Furukawa K, Kimura N

机构信息

Department of Agricultural Chemistry, Kyushu University, Fukuoka, Japan.

出版信息

Environ Health Perspect. 1995 Jun;103 Suppl 5(Suppl 5):21-3. doi: 10.1289/ehp.95103s421.

DOI:10.1289/ehp.95103s421
PMID:8565902
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1519308/
Abstract

Biphenyl(BP)-utilizing bacteria, which include both Gram-negative and Gram-positive strains, are ubiquitously distributed in the environment. These bacteria co-metabolically degrade a variety of polychlorinated biphenyl (PCB) congeners to the corresponding chlorobenzoic acids through 2,3-dioxygenation. Certain strains degrade even highly chlorinated PCBs through 3,4-dioxygenation. The ring meta-cleavage dioxygenase purified from Pseudomonas pseudoalcaligenes KF707 is a homo-octamer containing ferrous ions as the essential cofactor. Transposon mutants revealed that the bph-encoded enzymes possess a wide range of substrate specificity for various aromatic hydrocarbons. The bphABCXD gene cluster coding for the degradation of PCBs to chlorobenzoic acids was first cloned from P. pseudocaligenes KF707 and sequenced and then was cloned from a number of BP-utilizing strains and sequenced. Some strains possess a bph operon that is very similar, if not identical, to that of KF707. Some bph genes share homologies with different degrees. Deletion and shuffling of bph genes are also found.

摘要

利用联苯(BP)的细菌,包括革兰氏阴性菌和革兰氏阳性菌,在环境中广泛分布。这些细菌通过2,3-双加氧作用将多种多氯联苯(PCB)同系物共代谢降解为相应的氯苯甲酸。某些菌株甚至通过3,4-双加氧作用降解高度氯化的多氯联苯。从假产碱假单胞菌KF707中纯化的环间位裂解双加氧酶是一种含有亚铁离子作为必需辅因子的同八聚体。转座子突变体表明,bph编码的酶对各种芳香烃具有广泛的底物特异性。编码将多氯联苯降解为氯苯甲酸的bphABCXD基因簇首先从假产碱假单胞菌KF707中克隆并测序,然后从许多利用BP的菌株中克隆并测序。一些菌株拥有与KF707的bph操纵子非常相似(如果不是完全相同)的操纵子。一些bph基因具有不同程度的同源性。还发现了bph基因的缺失和改组。