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编码主要病毒体蛋白的乳酸乳球菌温和噬菌体TP901-1的一个基因组区域。

A genomic region of lactococcal temperate bacteriophage TP901-1 encoding major virion proteins.

作者信息

Johnsen M G, Appel K F, Madsen P L, Vogensen F K, Hammer K, Arnau J

机构信息

Danish Center for Lactic Acid Bacteria, Department of Dairy and Food Science, Royal Veterinary and Agricultural University, Frederiksberg, Denmark.

出版信息

Virology. 1996 Apr 15;218(2):306-15. doi: 10.1006/viro.1996.0199.

Abstract

Two major structural proteins, MHP (major head protein) and MTP (major tail protein), from the lactococcal temperate phage TP901-1 were sequenced at their amino acid termini, and derived degenerate oligonucleotides were used to locate the corresponding genes in the phage genome. This genomic region was sequenced. The sequence characterized includes a total of 11 open reading frames (ORFs) showing an operon structure. Upstream of each ORF, except ORF b2 and ORF x, potential ribosome-binding sites were found, suggesting independent translation. However, coupled translation is suggested for ORF x and as a possibility for ORF b3 and ORF c2, which have ribosome-binding sites located more distant from their start codons. ORF b2 may be translationally fused with mhp at a low frequency. The mhp and mtp genes are transcribed as a 3.7-kb mRNA with at least six additional ORFs. The organization of the genomic region analyzed resembles that of other distantly related phages, providing possible roles for the uncharacterized ORFs.

摘要

对来自乳球菌温和噬菌体TP901-1的两种主要结构蛋白,即主要头部蛋白(MHP)和主要尾部蛋白(MTP)的氨基酸末端进行了测序,并使用推导得到的简并寡核苷酸在噬菌体基因组中定位相应基因。对该基因组区域进行了测序。所表征的序列总共包含11个开放阅读框(ORF),呈现出操纵子结构。在每个ORF的上游,除了ORF b2和ORF x外,均发现了潜在的核糖体结合位点,这表明它们可独立翻译。然而,对于ORF x以及ORF b3和ORF c2(其核糖体结合位点距离起始密码子较远),提示存在偶联翻译。ORF b2可能以低频率与mhp发生翻译融合。mhp和mtp基因转录为一条3.7 kb的mRNA,其中至少还有六个其他ORF。所分析的基因组区域的组织方式与其他远缘噬菌体相似,这为未表征的ORF提供了可能的作用。

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