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利用克隆的MutY错配修复酶确定DNA突变的位点和性质。

Determining the site and nature of DNA mutations with the cloned MutY mismatch repair enzyme.

作者信息

Xu J F, Yang Q P, Chen J Y, van Baalen M R, Hsu I C

机构信息

Department of Pathology, School of Medicine, University of Maryland at Baltimore 21201, USA.

出版信息

Carcinogenesis. 1996 Feb;17(2):321-6. doi: 10.1093/carcin/17.2.321.

DOI:10.1093/carcin/17.2.321
PMID:8625458
Abstract

The Escherichia coli MutY gene was cloned into a modified pET-11 plasmid which was then transfected into an E.coli HMS174 host for overproduction of the MutY mismatch repair (MR) enzyme. Approximately 30-50% of the total cellular protein in the transformed HMS174 cells was isopropyl-beta-D-thiogalactoside-induced MutY protein, as estimated from the staining intensity on an SDS-PAGE gel following electrophoresis. The MutY protein was purified to near homogeneity by cellulose phosphate ion-exchange chromatography followed by gel filtration chromatography. The purified MutY protein had enzyme activities which cleaved the A of a G/A mismatch at the 3' end of the first phosphodiester bond and then the 5' end of the second phosphodiester bond of the A. It also cut the A of a C/A mismatch, but to a much lesser extent, and the activity was DNA sequence-dependent. The reliability of the assay in determining the site and nature of a DNA mutation was examined in human tumor DNA samples with known or unknown p53 mutations. In the assay, polymerase chain reaction-amplified DNA fragments from normal and mutated p53 genes were mixed, denatured and annealed to generate mismatches of G/A or C/A for cleavage by the MutY MR enzyme. The assay results revealed the site and nature of known G:C<-->T:A mutations. In addition, a previously unknown G:C to T:A mutation, which was misread in the sequencing analysis of a tumor DNA preparation, was identified by this assay.

摘要

将大肠杆菌MutY基因克隆到一个经过修饰的pET-11质粒中,然后将其转染到大肠杆菌HMS174宿主中,以过量生产MutY错配修复(MR)酶。根据电泳后SDS-PAGE凝胶上的染色强度估计,在转化的HMS174细胞中,约30%-50%的总细胞蛋白是异丙基-β-D-硫代半乳糖苷诱导的MutY蛋白。通过磷酸纤维素离子交换色谱法,然后是凝胶过滤色谱法,将MutY蛋白纯化至接近均一。纯化的MutY蛋白具有酶活性,可切割第一个磷酸二酯键3'端G/A错配中的A,然后切割该A的第二个磷酸二酯键的5'端。它也能切割C/A错配中的A,但程度要小得多,且该活性依赖于DNA序列。在已知或未知p53突变的人类肿瘤DNA样本中,检测了该测定法在确定DNA突变位点和性质方面的可靠性。在该测定法中,将来自正常和突变p53基因的聚合酶链反应扩增的DNA片段混合、变性并退火,以产生G/A或C/A错配,供MutY MR酶切割。测定结果揭示了已知的G:C<-->T:A突变的位点和性质。此外,该测定法还鉴定出了一个先前未知的G:C到T:A突变,该突变在一份肿瘤DNA制剂的测序分析中被误读。

相似文献

1
Determining the site and nature of DNA mutations with the cloned MutY mismatch repair enzyme.利用克隆的MutY错配修复酶确定DNA突变的位点和性质。
Carcinogenesis. 1996 Feb;17(2):321-6. doi: 10.1093/carcin/17.2.321.
2
Escherichia coli mutY gene encodes an adenine glycosylase active on G-A mispairs.大肠杆菌mutY基因编码一种对G-A错配具有活性的腺嘌呤糖基化酶。
Proc Natl Acad Sci U S A. 1989 Nov;86(22):8877-81. doi: 10.1073/pnas.86.22.8877.
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Detection of DNA point mutations with DNA mismatch repair enzymes.利用DNA错配修复酶检测DNA点突变。
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Escherichia coli MutY protein has a guanine-DNA glycosylase that acts on 7,8-dihydro-8-oxoguanine:guanine mispair to prevent spontaneous G:C-->C:G transversions.大肠杆菌MutY蛋白具有一种鸟嘌呤-DNA糖基化酶,该酶作用于7,8-二氢-8-氧代鸟嘌呤与鸟嘌呤的错配,以防止自发的G:C→C:G颠换。
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Site-directed mutagenesis of the cysteine ligands to the [4Fe-4S] cluster of Escherichia coli MutY.对大肠杆菌MutY的[4Fe-4S]簇的半胱氨酸配体进行定点诱变。
Biochemistry. 1999 Jun 1;38(22):6997-7007. doi: 10.1021/bi982300n.
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Escherichia coli MutY protein has both N-glycosylase and apurinic/apyrimidinic endonuclease activities on A.C and A.G mispairs.大肠杆菌MutY蛋白对A·C和A·G错配具有N-糖基化酶和脱嘌呤/脱嘧啶内切核酸酶活性。
Proc Natl Acad Sci U S A. 1992 Sep 15;89(18):8779-83. doi: 10.1073/pnas.89.18.8779.
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Characterization of an Escherichia coli mutant MutY with a cysteine to alanine mutation at the iron-sulfur cluster domain.一种在铁硫簇结构域发生半胱氨酸到丙氨酸突变的大肠杆菌突变体MutY的特性分析。
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Detection of single DNA base mutations with mismatch repair enzymes.利用错配修复酶检测单个DNA碱基突变。
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Specific recognition of A/G and A/7,8-dihydro-8-oxoguanine (8-oxoG) mismatches by Escherichia coli MutY: removal of the C-terminal domain preferentially affects A/8-oxoG recognition.大肠杆菌MutY对A/G和A/7,8-二氢-8-氧代鸟嘌呤(8-氧代鸟嘌呤,8-oxoG)错配的特异性识别:C末端结构域的去除优先影响A/8-氧代鸟嘌呤的识别。
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Efficient recognition of substrates and substrate analogs by the adenine glycosylase MutY requires the C-terminal domain.腺嘌呤糖基化酶MutY对底物和底物类似物的有效识别需要C末端结构域。
Nucleic Acids Res. 2001 Jan 15;29(2):553-64. doi: 10.1093/nar/29.2.553.

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