Zhang Q M, Ishikawa N, Nakahara T, Yonei S
Laboratory of Radiation Biology, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo-ku, Kyoto 606-8502, Japan.
Nucleic Acids Res. 1998 Oct 15;26(20):4669-75. doi: 10.1093/nar/26.20.4669.
Low rates of spontaneous G:C-->C:G transversions would be achieved not only by the correction of base mismatches during DNA replication but also by the prevention and removal of oxidative base damage in DNA. Escherichia coli must have several pathways to repair such mismatches and DNA modifications. In this study, we attempted to identify mutator loci leading to G:C-->C:G transversions in E.coli. The strain CC103 carrying a specific mutation in lacZ was mutagenized by random miniTn 10 insertion mutagenesis. In this strain, only the G:C-->C:G change can revert the glutamic acid at codon 461, which is essential for sufficient beta-galactosidase activity to allow growth on lactose. Mutator strains were detected as colonies with significantly increased rates of papillae formation on glucose minimal plates containing P-Gal and X-Gal. We screened approximately 40 000 colonies and selected several mutator strains. The strain GC39 showed the highest mutation rate to Lac+. The gene responsible for the mutator phenotypes, mut39 , was mapped at around 67 min on the E.coli chromosome. The sequencing of the miniTn 10 -flanking DNA region revealed that the mut39 was identical to the mutY gene of E.coli. The plasmid carrying the mutY + gene reduced spontaneous G:C-->T:A and G:C-->C:G mutations in both mutY and mut39 strains. Purified MutY protein bound to the oligonucleotides containing 7,8-dihydro-8-oxo-guanine (8-oxoG):G and 8-oxoG:A. Furthermore, we found that the MutY protein had a DNA glycosylase activity which removes unmodified guanine from the 8-oxoG:G mispair. These results demonstrate that the MutY protein prevents the generation of G:C-->C:G transversions by removing guanine from the 8-oxoG:G mispair in E.coli.
低频率的自发G:C→C:G颠换不仅可通过DNA复制过程中碱基错配的校正来实现,还可通过预防和去除DNA中的氧化碱基损伤来实现。大肠杆菌必定有多种途径来修复此类错配和DNA修饰。在本研究中,我们试图鉴定导致大肠杆菌中G:C→C:G颠换的突变基因座。携带lacZ特定突变的菌株CC103通过随机miniTn10插入诱变进行诱变。在该菌株中,只有G:C→C:G变化能使461位密码子处的谷氨酸回复突变,而该谷氨酸对于足够的β-半乳糖苷酶活性以允许在乳糖上生长至关重要。突变菌株被检测为在含有P-半乳糖和X-半乳糖的葡萄糖基本平板上乳头形成率显著增加的菌落。我们筛选了约40000个菌落并挑选了几个突变菌株。菌株GC39对Lac+显示出最高的突变率。导致突变表型的基因mut39定位于大肠杆菌染色体上约67分钟处。miniTn10侧翼DNA区域的测序表明,mut39与大肠杆菌的mutY基因相同。携带mutY+基因的质粒降低了mutY和mut39菌株中的自发G:C→T:A和G:C→C:G突变。纯化的MutY蛋白与含有7,8-二氢-8-氧代鸟嘌呤(8-氧代G):G和8-氧代G:A的寡核苷酸结合。此外,我们发现MutY蛋白具有DNA糖基化酶活性,可从8-氧代G:G错配中去除未修饰的鸟嘌呤。这些结果表明,MutY蛋白通过从大肠杆菌中的8-氧代G:G错配中去除鸟嘌呤来防止G:C→C:G颠换的产生。