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绿弯菌血红素B基因的结构与表达及其编码酶胆色素原合酶的特性

Structure and expression of the Chlorobium vibrioforme hemB gene and characterization of its encoded enzyme, porphobilinogen synthase.

作者信息

Rhie G, Avissar Y J, Beale S I

机构信息

Division of Biology and Medicine, Brown University, Providence, Rhode Island 02912, USA.

出版信息

J Biol Chem. 1996 Apr 5;271(14):8176-82. doi: 10.1074/jbc.271.14.8176.

Abstract

Plasmids containing DNA from the green photosynthetic bacterium Chlorobium vibrioforme complement a heme-requiring Escherichia coli hemB mutant that is deficient in porphobilinogen (PBG) synthase activity. PBG synthase activity was detected in extract of complemented cells but not in that of cells transformed with control plasmid. The sequence of the C. vibrioforme hemB gene predicts a HemB protein that contains 328 amino acids, has a molecular weight of 36,407, and is 53% identical to the homologous proteins of Synechocystis sp. PCC 6301 and Rhodobacter capsulatus. The response of C. vibrioforme PBG synthase to divalent metals is unlike that of any previously described PBG synthase; Mg2+ stimulates but is not required for activity, and Zn2+ neither stimulates nor is required. This response correlates with predicted sequences of two putative variable metal binding regions of C. vibrioforme HemB. The C. vibrioforme hemB open reading frame begins 1585 bases downstream from the end of the hemD open reading frame and is transcribed in the same direction as hemA, hemC, and hemD. However, hemB is not part of the same transcription unit as these genes, and the hemB transcript is approximately the same size as the hemB gene alone. Between hemD and hemB there is an intervening open reading frame that is oriented in the opposite direction and encodes a protein with a predicted amino acid sequence significantly similar to that of inositol monophosphatase, an enzyme that is not involved in tetrapyrrole biosynthesis. The gene order within hem gene clusters is highly conserved in phylogenetically diverse prokaryotic organisms. This conservation suggests that there are functional constraints on the relative order of the hem genes.

摘要

含有绿色光合细菌绿弯菌(Chlorobium vibrioforme)DNA的质粒可互补一株需要血红素的大肠杆菌hemB突变体,该突变体缺乏胆色素原(PBG)合酶活性。在互补细胞的提取物中检测到了PBG合酶活性,但在用对照质粒转化的细胞提取物中未检测到。绿弯菌hemB基因的序列预测其HemB蛋白含有328个氨基酸,分子量为36407,与集胞藻属(Synechocystis sp.)PCC 6301和荚膜红细菌(Rhodobacter capsulatus)的同源蛋白有53%的同一性。绿弯菌PBG合酶对二价金属的反应不同于任何先前描述的PBG合酶;Mg2+刺激活性但不是活性所必需的,而Zn2+既不刺激也不是必需的。这种反应与绿弯菌HemB两个假定的可变金属结合区域的预测序列相关。绿弯菌hemB开放阅读框始于hemD开放阅读框末端下游1585个碱基处,并与hemA、hemC和hemD转录方向相同。然而,hemB不是与这些基因相同转录单元的一部分,hemB转录本的大小与单独的hemB基因大致相同。在hemD和hemB之间有一个反向排列的间隔开放阅读框,它编码一种蛋白质,其预测的氨基酸序列与肌醇单磷酸酶的序列显著相似,肌醇单磷酸酶是一种不参与四吡咯生物合成的酶。hem基因簇内的基因顺序在系统发育上不同的原核生物中高度保守。这种保守性表明hem基因的相对顺序存在功能限制。

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