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应激诱导转录因子CHOP与一种新型DNA控制元件的结合。

Stress-induced binding of the transcriptional factor CHOP to a novel DNA control element.

作者信息

Ubeda M, Wang X Z, Zinszner H, Wu I, Habener J F, Ron D

机构信息

Laboratory of Molecular Endocrinology, Massachusetts General Hospital, Boston, Massachusetts 02114, USA.

出版信息

Mol Cell Biol. 1996 Apr;16(4):1479-89. doi: 10.1128/MCB.16.4.1479.

DOI:10.1128/MCB.16.4.1479
PMID:8657121
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC231132/
Abstract

CHOP (GADD153) is a mammalian nuclear protein that dimerizes with members of the C/EBP family of transcriptional factors. Absent under normal conditions, CHOP is induced by the stress encountered during nutrient deprivation, the acute-phase response, and treatment of cells with certain toxins. The basic region of CHOP deviates considerably in sequence from that of other C/EBP proteins, and CHOP-C/EBP heterodimers are incapable of binding to a common class of C/EBP sites. With respect to such sites, CHOP serves as an inhibitor of the activity of C/EBP proteins. However, recent studies indicate that certain functions of CHOP, such as the induction of growth arrest by overexpression of the wild-type protein and oncogenic transformation by the TLS-CHOP fusion protein, require an intact basic region, suggesting that DNA binding by CHOP may be implicated in these activities. In this study an in vitro PCR-based selection assay was used to identify sequences bound by CHOP-C/EBP dimers. These sequences were found to contain a unique core element PuPuPuTGCAAT(A/C)CCC. Competition in DNA-binding assays, DNase 1 footprint analysis, and methylation interference demonstrate that the binding is sequence specific. Deletions in the basic region of CHOP lead to a loss of DNA binding, suggesting that CHOP participates in this process. Stress induction in NIH 3T3 cells leads to the appearance of CHOP-containing DNA-binding activity. CHOP is found to contain a transcriptional activation domain which is inducible by cellular stress, lending further support to the notion that the protein can function as a positively acting transcription factor. We conclude that CHOP may serve a dual role both as an inhibitor of the ability of C/EBP proteins to activate some target genes and as a direct activator of others.

摘要

CHOP(GADD153)是一种哺乳动物核蛋白,它与转录因子C/EBP家族的成员形成二聚体。在正常条件下不存在,CHOP在营养剥夺、急性期反应以及用某些毒素处理细胞时所遇到的应激情况下被诱导产生。CHOP的碱性区域在序列上与其他C/EBP蛋白有很大差异,并且CHOP-C/EBP异二聚体无法结合到一类常见的C/EBP位点。就这些位点而言,CHOP作为C/EBP蛋白活性的抑制剂。然而,最近的研究表明,CHOP的某些功能,如野生型蛋白过表达诱导生长停滞以及TLS-CHOP融合蛋白导致的致癌转化,需要完整的碱性区域,这表明CHOP与DNA的结合可能与这些活性有关。在本研究中,使用基于体外PCR的筛选试验来鉴定CHOP-C/EBP二聚体结合的序列。发现这些序列包含一个独特的核心元件PuPuPuTGCAAT(A/C)CCC。DNA结合试验中的竞争、DNase 1足迹分析和甲基化干扰表明这种结合具有序列特异性。CHOP碱性区域的缺失导致DNA结合能力丧失,表明CHOP参与了这一过程。NIH 3T3细胞中的应激诱导导致出现含CHOP的DNA结合活性。发现CHOP含有一个可被细胞应激诱导的转录激活结构域,这进一步支持了该蛋白可作为正向作用转录因子发挥功能的观点。我们得出结论,CHOP可能具有双重作用,既是C/EBP蛋白激活某些靶基因能力的抑制剂,又是其他一些靶基因的直接激活剂。

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2
Identification of three residues in the basic regions of the bZIP proteins GCN4, C/EBP and TAF-1 that are involved in specific DNA binding.鉴定碱性亮氨酸拉链蛋白GCN4、C/EBP和TAF-1的碱性区域中参与特异性DNA结合的三个残基。
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Identification of C/EBP basic region residues involved in DNA sequence recognition and half-site spacing preference.参与DNA序列识别和半位点间距偏好的C/EBP碱性区域残基的鉴定。
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4
Regulation of the C/EBP-related gene gadd153 by glucose deprivation.葡萄糖剥夺对C/EBP相关基因gadd153的调控
Mol Cell Biol. 1993 Aug;13(8):4736-44. doi: 10.1128/mcb.13.8.4736-4744.1993.
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The gadd and MyD genes define a novel set of mammalian genes encoding acidic proteins that synergistically suppress cell growth.gadd基因和MyD基因定义了一组新的哺乳动物基因,这些基因编码酸性蛋白,能协同抑制细胞生长。
Mol Cell Biol. 1994 Apr;14(4):2361-71. doi: 10.1128/mcb.14.4.2361-2371.1994.
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7
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