Sideraki V, Mohamedali K A, Wilson D K, Chang Z, Kellems R E, Quiocho F A, Rudolph F B
Department of Biochemistry and Cell Biology, Rice University, Houston, Texas 77005, USA.
Biochemistry. 1996 Jun 18;35(24):7862-72. doi: 10.1021/bi952920d.
Two adjacent aspartates, Asp 295 and Asp 296, playing major roles in the reaction catalyzed by mouse adenosine deaminase (mADA) were altered using site-directed mutagenesis. These mutants were expressed and purified from an ADA-deficient bacterial strain and characterized. Circular dichroism spectroscopy shows the mutants to have unperturbed secondary structure. Their zinc content compares well to that of wild-type enzyme. Changing Asp 295 to a glutamate decreases the kcat but does not alter the Km for adenosine, confirming the importance of this residue in the catalytic process and its minimal role in substrate binding. The crystal structure of the D295E mutant reveals a displacement of the catalytic water from the active site due to the longer glutamate side chain, resulting in the mutant's inability to turn over the substrate. In contrast, Asp 296 mutants exhibit markedly increased Km values, establishing this residue's critical role in substrate binding. The Asp 296->Ala mutation causes a 70-fold increase in the Km for adenosine and retains 0.001% of the wild-type kcat/Km value, whereas the ASP 296->Asn mutant has a 10-fold higher Km and retains 1% of the wild-type kcat/Km value. The structure of the D296A mutant shows that the impaired binding of substrate is caused by the loss of a single hydrogen bond between a carboxylate oxygen and N7 of the purine ring. These results and others discussed below are in agreement with the postulated role of the adjacent aspartates in the catalytic mechanism for mADA.
利用定点诱变技术改变了小鼠腺苷脱氨酶(mADA)催化反应中起主要作用的两个相邻天冬氨酸残基,即Asp 295和Asp 296。这些突变体在缺乏ADA的细菌菌株中表达、纯化并进行了特性鉴定。圆二色光谱显示突变体的二级结构未受干扰。它们的锌含量与野生型酶相当。将Asp 295替换为谷氨酸会降低催化常数(kcat),但不会改变腺苷的米氏常数(Km),这证实了该残基在催化过程中的重要性及其在底物结合中所起的最小作用。D295E突变体的晶体结构显示,由于谷氨酸侧链较长,催化水从活性位点发生位移,导致突变体无法转化底物。相比之下,Asp 296突变体的Km值显著增加,确立了该残基在底物结合中的关键作用。Asp 296突变为丙氨酸会使腺苷的Km增加70倍,仅保留野生型kcat/Km值的0.001%,而ASP 296突变为天冬酰胺的突变体的Km值高出10倍,保留了野生型kcat/Km值的1%。D296A突变体的结构表明,底物结合受损是由于嘌呤环的羧基氧与N7之间的一个氢键缺失所致。这些结果以及下文讨论的其他结果与相邻天冬氨酸在mADA催化机制中所假定的作用一致。