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通过反向剪接将内含子RNA高效整合到双链DNA中。

Efficient integration of an intron RNA into double-stranded DNA by reverse splicing.

作者信息

Yang J, Zimmerly S, Perlman P S, Lambowitz A M

机构信息

Department of Molecular Genetics, The Ohio State University, Columbus 43210-1292, USA.

出版信息

Nature. 1996 May 23;381(6580):332-5. doi: 10.1038/381332a0.

DOI:10.1038/381332a0
PMID:8692273
Abstract

Some group II introns are mobile elements as well as catalytic RNAs. Introns aI1 and aI2 found in the gene COX1 in yeast mitochondria encode reverse transcriptases which promote site-specific insertion of the intron into intronless alleles ('homing'). For aI2 this predominantly occurs by reverse transcription of unspliced precursor RNA at a break in double-strand DNA made by an endonuclease encoded by the intron. The aI2 endonuclease involves both the excised intron RNA, which cleaves the DNA's sense strand by partial reverse splicing; and the intron-encoded reverse transcriptase which cleaves the anti-sense strand. Here we show that aI1 encodes an analogous endonuclease specific for a different target site compatible with the different exon-binding sequences of the intron RNA. Over half of aI1 undergoes complete reverse splicing in vitro, thus integrating linear intron RNA directly into the DNA. This unprecedented reaction has implications for both intron mobility and evolution, and potential genetic engineering applications.

摘要

一些II类内含子既是可移动元件,也是催化性RNA。在酵母线粒体基因COX1中发现的内含子aI1和aI2编码逆转录酶,这些逆转录酶促进内含子位点特异性插入无内含子的等位基因(“归巢”)。对于aI2,这主要是通过由内含子编码的内切核酸酶在双链DNA的一个断裂处对未剪接的前体RNA进行逆转录来实现的。aI2内切核酸酶涉及切除的内含子RNA,它通过部分逆转剪接切割DNA的有义链;以及切割反义链的内含子编码逆转录酶。在这里,我们表明aI1编码一种类似的内切核酸酶,该内切核酸酶对与内含子RNA不同的外显子结合序列兼容的不同靶位点具有特异性。超过一半的aI1在体外经历完全逆转剪接,从而将线性内含子RNA直接整合到DNA中。这种前所未有的反应对内含子的移动性和进化以及潜在的基因工程应用都有影响。

相似文献

1
Efficient integration of an intron RNA into double-stranded DNA by reverse splicing.通过反向剪接将内含子RNA高效整合到双链DNA中。
Nature. 1996 May 23;381(6580):332-5. doi: 10.1038/381332a0.
2
Group II intron reverse transcriptase in yeast mitochondria. Stabilization and regulation of reverse transcriptase activity by the intron RNA.酵母线粒体中的II组内含子逆转录酶。内含子RNA对逆转录酶活性的稳定作用与调控。
J Mol Biol. 1999 Jun 11;289(3):473-90. doi: 10.1006/jmbi.1999.2778.
3
Group II intron mobility in yeast mitochondria: target DNA-primed reverse transcription activity of aI1 and reverse splicing into DNA transposition sites in vitro.酵母线粒体中II类内含子的移动性:aI1的靶DNA引发的逆转录活性及体外反向剪接至DNA转座位点
J Mol Biol. 1998 Sep 25;282(3):505-23. doi: 10.1006/jmbi.1998.2029.
4
Mobile group II introns of yeast mitochondrial DNA are novel site-specific retroelements.酵母线粒体DNA的移动II类内含子是新型位点特异性反转录元件。
Mol Cell Biol. 1995 May;15(5):2828-38. doi: 10.1128/MCB.15.5.2828.
5
Reverse transcriptase and reverse splicing activities encoded by the mobile group II intron cobI1 of fission yeast mitochondrial DNA.裂殖酵母线粒体DNA的移动II组内含子cobI1编码的逆转录酶和反向剪接活性。
J Mol Biol. 2003 May 30;329(2):191-206. doi: 10.1016/s0022-2836(03)00441-8.
6
The DIVa maturase binding site in the yeast group II intron aI2 is essential for intron homing but not for in vivo splicing.酵母II组内含子aI2中的DIVa成熟酶结合位点对于内含子归巢至关重要,但对于体内剪接并非如此。
Mol Cell Biol. 2003 Dec;23(23):8809-19. doi: 10.1128/MCB.23.23.8809-8819.2003.
7
Group II intron mobility occurs by target DNA-primed reverse transcription.II类内含子的移动性通过靶DNA引发的逆转录作用发生。
Cell. 1995 Aug 25;82(4):545-54. doi: 10.1016/0092-8674(95)90027-6.
8
Multiple homing pathways used by yeast mitochondrial group II introns.酵母线粒体II类内含子所使用的多种归巢途径。
Mol Cell Biol. 2000 Nov;20(22):8432-46. doi: 10.1128/MCB.20.22.8432-8446.2000.
9
Group II intron endonucleases use both RNA and protein subunits for recognition of specific sequences in double-stranded DNA.II类内含子内切核酸酶利用RNA和蛋白质亚基来识别双链DNA中的特定序列。
EMBO J. 1997 Nov 17;16(22):6835-48. doi: 10.1093/emboj/16.22.6835.
10
Mobility of yeast mitochondrial group II introns: engineering a new site specificity and retrohoming via full reverse splicing.酵母线粒体II类内含子的移动性:通过完全反向剪接设计新的位点特异性和归巢
Cell. 1997 Mar 21;88(6):865-74. doi: 10.1016/s0092-8674(00)81932-7.

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