National Agri-Food Biotechnology Institute (NABI), Mohali Punjab 140306, India.
Department of Agronomy and Plant Genetics University of Minnesota, St. Paul, MN 55108-6026, USA.
Cells. 2019 Nov 4;8(11):1386. doi: 10.3390/cells8111386.
Genome-editing, a recent technological advancement in the field of life sciences, is one of the great examples of techniques used to explore the understanding of the biological phenomenon. Besides having different site-directed nucleases for genome editing over a decade ago, the CRISPR/Cas (clustered regularly interspaced short palindromic repeats/CRISPR-associated protein) based genome editing approach has become a choice of technique due to its simplicity, ease of access, cost, and flexibility. In the present review, several CRISPR/Cas based approaches have been discussed, considering recent advances and challenges to implicate those in the crop improvement programs. Successful examples where CRISPR/Cas approach has been used to improve the biotic and abiotic stress tolerance, and traits related to yield and plant architecture have been discussed. The review highlights the challenges to implement the genome editing in polyploid crop plants like wheat, canola, and sugarcane. Challenges for plants difficult to transform and germline-specific gene expression have been discussed. We have also discussed the notable progress with multi-target editing approaches based on polycistronic tRNA processing, Csy4 endoribonuclease, intron processing, and Drosha ribonuclease. Potential to edit multiple targets simultaneously makes it possible to take up more challenging tasks required to engineer desired crop plants. Similarly, advances like precision gene editing, promoter bashing, and methylome-editing will also be discussed. The present review also provides a catalog of available computational tools and servers facilitating designing of guide-RNA targets, construct designs, and data analysis. The information provided here will be useful for the efficient exploration of technological advances in genome editing field for the crop improvement programs.
基因组编辑是生命科学领域的一项最新技术进步,是用于探索生物现象理解的技术之一。除了十多年前具有不同的靶向核酸酶用于基因组编辑之外,基于 CRISPR/Cas(成簇规律间隔短回文重复/CRISPR 相关蛋白)的基因组编辑方法由于其简单性、易于获得、成本和灵活性而成为一种选择技术。在本综述中,讨论了几种基于 CRISPR/Cas 的方法,考虑了最近的进展和挑战,将其纳入作物改良计划。讨论了成功的例子,其中 CRISPR/Cas 方法已被用于提高生物和非生物胁迫耐受性以及与产量和植物结构相关的性状。该综述强调了在小麦、油菜和甘蔗等多倍体作物中实施基因组编辑的挑战。还讨论了难以转化的植物和种系特异性基因表达的挑战。我们还讨论了基于多顺反子 tRNA 加工、Csy4 内切核糖核酸酶、内含子加工和 Drosha 核糖核酸酶的多靶点编辑方法的显著进展。同时编辑多个靶点的潜力使其有可能承担设计所需作物植物所需的更具挑战性的任务。同样,还将讨论精确基因编辑、启动子捣碎和甲基组编辑等方面的进展。本综述还提供了可用的计算工具和服务器目录,以方便设计向导 RNA 靶标、构建设计和数据分析。这里提供的信息将有助于有效探索基因组编辑领域的技术进步,以促进作物改良计划。