Huang D B, Ainsworth C F, Stevens F J, Schiffer M
Center for Mechanistic Biology and Biotechnology, Argonne National Laboratory, Argonne, IL 60439-4833, USA.
Proc Natl Acad Sci U S A. 1996 Jul 9;93(14):7017-21. doi: 10.1073/pnas.93.14.7017.
The structure of a multisubunit protein (immunoglobulin light chain) was solved in three crystal forms, differing only in the solvent of crystallization. The three structures were obtained at high ionic strength and low pH, high ionic strength and high pH, and low ionic strength and neutral pH. The three resulting "snapshots" of possible structures show that their variable-domain interactions differ, reflecting their stabilities under specific solvent conditions. In the three crystal forms, the variable domains had different rotational and translational relationships, whereas no alteration of the constant domains was found. The critical residues involved in the observed effect of the solvent are tryptophans and histidines located between the two variable domains in the dimeric structure. Tryptophan residues are commonly found in interfaces between proteins and their subunits, and histidines have been implicated in pH-dependent conformation changes. The quaternary structure observed for a multisubunit protein or protein complex in a crystal may be influenced by the interactions of the constituents within the molecule or complex and/or by crystal packing interactions. The comparison of buried surface areas and hydrogen bonds between the domains forming the molecule and between the molecules forming the crystals suggest that, for this system, the interactions within the molecule are most likely the determining factors.
一种多亚基蛋白(免疫球蛋白轻链)的结构以三种晶体形式解析出来,这三种晶体形式仅在结晶溶剂方面有所不同。这三种结构分别是在高离子强度和低pH值、高离子强度和高pH值以及低离子强度和中性pH值条件下获得的。这三种可能结构的“快照”表明,它们可变结构域的相互作用不同,这反映了它们在特定溶剂条件下的稳定性。在这三种晶体形式中,可变结构域具有不同的旋转和平移关系,而恒定结构域未发现改变。在二聚体结构中,位于两个可变结构域之间的色氨酸和组氨酸是观察到的溶剂效应所涉及的关键残基。色氨酸残基常见于蛋白质与其亚基之间的界面,而组氨酸与pH依赖的构象变化有关。在晶体中观察到的多亚基蛋白或蛋白复合物的四级结构可能受到分子或复合物内成分之间的相互作用和/或晶体堆积相互作用的影响。对形成分子的结构域之间以及形成晶体的分子之间的埋藏表面积和氢键的比较表明,对于这个系统,分子内的相互作用很可能是决定性因素。