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高分辨率荧光原位杂交:基因组图谱绘制的新方法。

High-resolution fluorescence in situ hybridization: a new approach in genome mapping.

作者信息

Palotie A, Heiskanen M, Laan M, Horelli-Kuitunen N

机构信息

Laboratory Department of Helsinki University Central Hospital, Finland.

出版信息

Ann Med. 1996 Apr;28(2):101-6. doi: 10.3109/07853899609092933.

DOI:10.3109/07853899609092933
PMID:8732637
Abstract

Mapping of the human genome has been a global effort utilizing both genetic and physical mapping techniques. One approach which has greatly facilitated the physical mapping of the human genome is fluorescence in situ hybridization (FISH). Although FISH is by now a well-established technology, new recently developed modifications have enabled an easier use and higher resolution. The high-resolution FISH techniques have given a special impact in positional cloning: searching the functional gene from a chromosomal area where the gene has been genetically localized. New high-resolution FISH techniques include hybridization of probes to free chromatin, DNA fibres or mechanically stretched chromosomes. These targets have widened the resolution of FISH to detect distances from the traditional cytogenetic resolution level down to a resolution of a few kilobases. They also have significantly speeded up high-resolution physical mapping and thus made the search of new disease genes easier.

摘要

人类基因组图谱绘制是一项全球性的工作,运用了遗传和物理图谱绘制技术。荧光原位杂交(FISH)极大地推动了人类基因组物理图谱绘制工作,这是其中一种方法。尽管如今FISH已是一项成熟的技术,但最近新开发的改进方法使其使用起来更加便捷,分辨率也更高。高分辨率FISH技术在定位克隆方面产生了特殊影响:从基因已被遗传定位的染色体区域寻找功能基因。新的高分辨率FISH技术包括将探针与游离染色质、DNA纤维或机械拉伸的染色体进行杂交。这些靶点拓宽了FISH的分辨率,能够检测的距离从传统细胞遗传学分辨率水平降至几千碱基的分辨率。它们还显著加快了高分辨率物理图谱绘制的速度,从而使寻找新的疾病基因变得更加容易。

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1
High-resolution fluorescence in situ hybridization: a new approach in genome mapping.高分辨率荧光原位杂交:基因组图谱绘制的新方法。
Ann Med. 1996 Apr;28(2):101-6. doi: 10.3109/07853899609092933.
2
Mechanically stretched chromosomes as targets for high-resolution FISH mapping.机械拉伸的染色体作为高分辨率荧光原位杂交图谱绘制的靶标。
Genome Res. 1995 Aug;5(1):13-20. doi: 10.1101/gr.5.1.13.
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Application of fluorescence in situ hybridization in genome analysis of the mouse.荧光原位杂交在小鼠基因组分析中的应用。
Electrophoresis. 1995 Feb;16(2):261-72. doi: 10.1002/elps.1150160142.
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Utilization of FISH in positional cloning: an example on 13q22.
Genome Res. 1996 Oct;6(10):1002-12. doi: 10.1101/gr.6.10.1002.
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Super-stretched pachytene chromosomes for fluorescence in situ hybridization mapping and immunodetection of DNA methylation.用于荧光原位杂交作图和DNA甲基化免疫检测的超拉伸粗线期染色体。
Plant J. 2009 Aug;59(3):509-16. doi: 10.1111/j.1365-313X.2009.03881.x. Epub 2009 Mar 30.
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Fluorescent In Situ Hybridization on Extended Chromatin Fibers for High-Resolution Analysis of Plant Chromosomes.用于植物染色体高分辨率分析的伸展染色质纤维荧光原位杂交
Methods Mol Biol. 2016;1429:23-33. doi: 10.1007/978-1-4939-3622-9_3.
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Visual mapping by fiber-FISH.纤维荧光原位杂交的视觉图谱分析
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In situ hybridization of fluorescent probes on chromosomes, nuclei or stretched DNA: applications in physical mapping and characterization of genomic rearrangements.荧光探针在染色体、细胞核或拉伸DNA上的原位杂交:在物理图谱绘制和基因组重排特征分析中的应用
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Mapping ESTs by fiber-FISH.通过纤维荧光原位杂交技术定位表达序列标签
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[Extending the capabilities of human chromosome analysis: from high-resolution banding to chromatin fiber-FISH].[扩展人类染色体分析的能力:从高分辨率显带到染色质纤维荧光原位杂交]
Hum Cell. 1997 Jun;10(2):121-34.