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从景天酸代谢(CAM)植物落地生根中分离并分析编码液泡型H(+) -ATPase c亚基的cDNA序列

Isolation and sequence analysis of a cDNA encoding the c subunit of a vacuolar-type H(+)-ATPase from the CAM plant Kalanchoë daigremontiana.

作者信息

Bartholomew D M, Rees D J, Rambaut A, Smith J A

机构信息

Department of Plant Sciences, University of Oxford, UK.

出版信息

Plant Mol Biol. 1996 May;31(2):435-42. doi: 10.1007/BF00021806.

DOI:10.1007/BF00021806
PMID:8756609
Abstract

We report the sequence of a cDNA clone encoding the c ("16 kDa') subunit of a vacuolar-type H(+)-ATPase (V-ATPase) from Kalanchoë daigremontiana, a plant in which the cell vacuole plays a pivotal role in crassulacean acid metabolism. The clone, pKVA211, was isolated from a K. daigremontiana leaf cDNA library constructed in lambda ZAP II using a homologous PCR-generated cDNA probe for the V-ATPase c subunit. The KVA211 cDNA was 839 nucleotides long and included a 20 bp poly(A)+ tail together with a complete 495 bp coding region for a polypeptide with a predicted molecular mass of 16659 Da. The deduced amino acid sequence was highly conserved across the wide range of eukaryotes (vertebrates, invertebrates, fungi, plants and protozoa) in which this gene has now been identified. Sequence comparison of several PCR products and genomic Southern analysis indicated that the V-ATPase c subunit in K. daigremontiana is encoded by a small multi-gene family. Steady-state levels of the KVA211 mRNA were much higher in leaves than in roots or flowers, and expression of this transcript in leaves was shown to be strongly light-dependent.

摘要

我们报道了编码来自落地生根(一种其细胞液泡在景天酸代谢中起关键作用的植物)的液泡型H(+)-ATP酶(V-ATP酶)的c(“16 kDa”)亚基的cDNA克隆序列。该克隆pKVA211是使用针对V-ATP酶c亚基的同源PCR产生的cDNA探针,从构建于λZAP II中的落地生根叶片cDNA文库中分离得到的。KVA211 cDNA长839个核苷酸,包括一个20 bp的聚腺苷酸尾巴以及一个完整的495 bp编码区,编码一个预测分子量为16659 Da的多肽。推导的氨基酸序列在现已鉴定出该基因的广泛真核生物(脊椎动物、无脊椎动物、真菌、植物和原生动物)中高度保守。几种PCR产物的序列比较和基因组Southern分析表明,落地生根中的V-ATP酶c亚基由一个小的多基因家族编码。KVA211 mRNA的稳态水平在叶片中比在根或花中高得多,并且该转录本在叶片中的表达显示出强烈的光依赖性。

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本文引用的文献

1
Separation and purification of the tonoplast ATPase and pyrophosphatase from plants with constitutive and inducible Crassulacean acid metabolism.用具有组成型和诱导型景天科酸代谢的植物分离和纯化液泡膜 ATP 酶和焦磷酸酶。
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Subunit Composition and Organization of the Vacuolar H-ATPase from Oat Roots.燕麦根液泡 H+-ATP 酶的亚基组成和结构。
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3
Vacuolar-Type H+ -ATPases Are Associated with the Endoplasmic Reticulum and Provacuoles of Root Tip Cells.
液泡型H⁺-ATP酶与根尖细胞的内质网和前液泡相关。
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Salt regulation of transcript levels for the c subunit of a leaf vacuolar H(+)-ATPase in the halophyte Mesembryanthemum crystallinum.盐生植物冰花叶液泡H(+) -ATP酶c亚基转录水平的盐调控
Plant J. 1996 May;9(5):729-36. doi: 10.1046/j.1365-313x.1996.9050729.x.
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Identification of protein coding regions by database similarity search.通过数据库相似性搜索鉴定蛋白质编码区域。
Nat Genet. 1993 Mar;3(3):266-72. doi: 10.1038/ng0393-266.
7
Disposition and orientation of ductin (DCCD-reactive vacuolar H(+)-ATPase subunit) in mammalian membrane complexes.导管蛋白(二环己基碳二亚胺反应性液泡H(+) -ATP酶亚基)在哺乳动物膜复合物中的分布与取向
Exp Cell Res. 1993 Aug;207(2):261-70. doi: 10.1006/excr.1993.1192.
8
The proteolipid subunit of the Neurospora crassa vacuolar ATPase: isolation of the protein and the vma-3 gene.粗糙脉孢菌液泡ATP酶的蛋白脂质亚基:蛋白质及vma - 3基因的分离
Mol Gen Genet. 1994 Apr;243(1):82-90. doi: 10.1007/BF00283879.
9
The contribution of AAUAAA and the upstream element UUUGUA to the efficiency of mRNA 3'-end formation in plants.AAUAAA和上游元件UUUGUA对植物mRNA 3'末端形成效率的贡献。
EMBO J. 1994 May 1;13(9):2200-10. doi: 10.1002/j.1460-2075.1994.tb06497.x.
10
Prediction of transmembrane segments in proteins utilising multiple sequence alignments.利用多序列比对预测蛋白质中的跨膜片段。
J Mol Biol. 1994 Mar 25;237(2):182-92. doi: 10.1006/jmbi.1994.1220.