Craven C J, Whitehead B, Jones S K, Thulin E, Blackburn G M, Waltho J P
Department of Molecular Biology and Biotechnology, University of Sheffield, U.K.
Biochemistry. 1996 Aug 13;35(32):10287-99. doi: 10.1021/bi9605043.
The binding of the antagonists N-(8-aminooctyl)-5-iodonaphthalene-1-sulfonamide (J-8) and trifluoperazine (TFP) to intact calcium-saturated bovine calmodulin (CaM) and also of J-8 to the C-terminal domain (tr2c) has been investigated. Using a combination of NMR methods, including NOESY data, mobility measurements, and chemical shift and line-shape analysis, we show that the primary interaction between J-8 and tr2c is between the naphthalene ring of the antagonist and the hydrophobic pocket of the protein, similar to the binding of the hydrophobic side-chain residues of calmodulin target peptides. Comparison of the mobility of the drug, the intensity and pattern of intermolecular NOESY cross-peaks, and chemical shift changes shows that there is no significant change in the binding mode in J-8. CaM compared to J-8.tr2c, with one molecule binding to each domain. In particular, we find that the mobility of the aliphatic amino "tail" of J-8 remains highly mobile in both systems. This contrasts with the notion that the tail may bridge between the two domains to give a "globular" form of CaM. We also show that TFP induces very similar shift changes to J-8 and that the stoichiometry of the major binding event in all three cases is one drug molecule per domain. It also appears that secondary binding sites for the drug molecules are present in all three systems.
已对拮抗剂N-(8-氨基辛基)-5-碘萘-1-磺酰胺(J-8)和三氟拉嗪(TFP)与完整的钙饱和牛钙调蛋白(CaM)的结合以及J-8与C末端结构域(tr2c)的结合进行了研究。通过结合使用多种核磁共振方法,包括NOESY数据、迁移率测量以及化学位移和线形分析,我们表明J-8与tr2c之间的主要相互作用发生在拮抗剂的萘环与蛋白质的疏水口袋之间,这类似于钙调蛋白靶肽的疏水侧链残基的结合。对药物迁移率、分子间NOESY交叉峰的强度和模式以及化学位移变化的比较表明,与J-8.tr2c相比,J-8与CaM结合时结合模式没有显著变化,每个结构域结合一个分子。特别是,我们发现J-8的脂肪族氨基“尾巴”在两个系统中都保持高度可移动性。这与尾巴可能在两个结构域之间形成桥接以产生“球状”形式的CaM这一观点形成对比。我们还表明,TFP诱导的位移变化与J-8非常相似,并且在所有三种情况下主要结合事件的化学计量比都是每个结构域一个药物分子。似乎在所有三个系统中都存在药物分子的二级结合位点。