Weber G, Da Poian A T, Silva J L
Departamento de Bioquimica, Universidade Federal do Rio de Janeiro, Brazil.
Biophys J. 1996 Jan;70(1):167-73. doi: 10.1016/S0006-3495(96)79557-7.
A theoretical model is presented that accounts for the facilitation of the pressure dissociation of R17 phage, and for the partial restoration of the concentration dependence of the dissociation, by the presence of subdenaturing concentrations of urea. As an indifferent osmolyte urea should promote the stability of the protein aggregates under pressure, and the decrease in pressure stability with urea concentration demonstrates that such indirect solvent effects are not significant for this case, and that the progressive destabilization is the result of direct protein-urea interactions. By acting as a "homogenizer" of the properties of the phage particles, urea addition converts the pressure-induced deterministic dissociation of the phage into a limited stochastic equilibrium. The model establishes the origin of the uniform progression from the stochastic equilibrium of dimers, to the temperature-dependent and partially concentration-dependent association of tetramers, to the fully deterministic equilibrium observed in many multimers and in the virus capsids.
提出了一个理论模型,该模型解释了在存在亚变性浓度尿素的情况下,促进R17噬菌体压力解离以及部分恢复解离浓度依赖性的现象。作为一种中性渗透剂,尿素应能促进压力下蛋白质聚集体的稳定性,而压力稳定性随尿素浓度的降低表明,这种间接溶剂效应在这种情况下并不显著,且逐步去稳定化是蛋白质与尿素直接相互作用的结果。通过充当噬菌体颗粒性质的“均化剂”,添加尿素将压力诱导的噬菌体确定性解离转化为有限的随机平衡。该模型确定了从二聚体的随机平衡,到四聚体的温度依赖性和部分浓度依赖性缔合,再到在许多多聚体和病毒衣壳中观察到的完全确定性平衡的均匀进展的起源。