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缩小8号染色体长臂上鳃耳肾区域的遗传间隔和酵母人工染色体图谱。

Narrowing the genetic interval and yeast artificial chromosome map in the branchio-oto-renal region on chromosome 8q.

作者信息

Kumar S, Kimberling W J, Lanyi A, Sumegi J, Pinnt J, Ing P, Tinley S, Marres H A, Cremers C W

机构信息

Department of Genetics, Boys Town National Research Hospital, Omaha, Nebraska 68131, USA.

出版信息

Genomics. 1996 Jan 1;31(1):71-9. doi: 10.1006/geno.1996.0011.

Abstract

Branchio-oto-renal (BOR) syndrome is an autosomal dominant disorder characterized by branchial abnormality, hearing loss, and renal anomalies. Recently, the disease gene has been localized to chromosome 8q. Here, we report genetic studies that further refine the disease gene region to a smaller interval and identify several YACs from the critical region. We studied two large, clinically well-characterized BOR families with a set of 13 polymorphic markers spanning the D8S165-D8S275 interval from the chromosome 8q region. Based on multipoint analysis, the highest likelihood for the location of the BOR gene is between markers D8S543 and D8S530, a distance of about 2 cM. YACs that map in the BOR critical region have been identified and characterized by fluorescence in situ hybridization and pulsed-field gel electrophoresis. A YAC contig, based on the STS content map, that covers a minimum of 4 Mb of human DNA in the critical region of BOR is assembled. This lays the groundwork for the construction of a transcriptional map of this region and the eventual identification of genes involved in BOR syndrome.

摘要

鳃耳肾(BOR)综合征是一种常染色体显性疾病,其特征为鳃部异常、听力丧失和肾脏畸形。最近,该疾病基因已被定位到8号染色体q区。在此,我们报告了一些遗传学研究,这些研究进一步将疾病基因区域缩小至一个更小的区间,并从关键区域鉴定出了几个酵母人工染色体(YAC)。我们用一组13个多态性标记研究了两个临床特征明确的大型BOR家系,这些标记跨越8号染色体q区的D8S165 - D8S275区间。基于多点分析,BOR基因定位的最高可能性位于标记D8S543和D8S530之间,距离约为2厘摩(cM)。已通过荧光原位杂交和脉冲场凝胶电泳鉴定并表征了定位在BOR关键区域的YAC。基于序列标签位点(STS)含量图谱,构建了一个覆盖BOR关键区域至少4兆碱基(Mb)人类DNA的YAC重叠群。这为构建该区域的转录图谱以及最终鉴定参与BOR综合征的基因奠定了基础。

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