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人类肠道防御素基因:染色体图谱定位及可能的进化关系模型

Human enteric defensin genes: chromosomal map position and a model for possible evolutionary relationships.

作者信息

Bevins C L, Jones D E, Dutra A, Schaffzin J, Muenke M

机构信息

Division of Human Genetics and Molecular Biology, Children's Hospital of Philadelphia, Pennsylvania 19104, USA.

出版信息

Genomics. 1996 Jan 1;31(1):95-106. doi: 10.1006/geno.1996.0014.

Abstract

Defensins, a family of antimicrobial peptides isolated from several mammalian species, have a proposed functional role in innate host defense. In humans, certain defensin genes are expressed in phagocytic cells of hematopoietic origin, while others are expressed in Paneth cells, epithelial cells of the small intestine. In this study, we determined the chromosomal localization of the human defensin (HD) genes expressed in Paneth cells, HD-5 and HD-6. Analysis of a panel of human/hamster hybrids localized both HD-5 and HD-6 to chromosome 8. Southern blot analysis of DNA from cell lines that contain either chromosome 8 deletions or duplications further localized these two genes to 8p21-pter. Fluorescence in situ hybridization analysis of metaphase chromosomes using an HD-5 probe further supported the regional map assignment. Previous studies had localized the hematopoietic genes to chromosome 8p23, and the current work is consistent with both the enteric and the myeloid defensin genes being located at the same cytogenetic region of chromosome 8. In addition, the evolutionary relationships of this gene family were addressed using dot matrix sequence analysis. From this analysis, a model for the possible evolutionary history of the human defensin genes is proposed. According to this model, an early duplication of a primordial defensin gene yielded the ancestral genes of present day HD-5 and HD-6. The model further suggests that a subsequent unequal meiotic crossover event had generated an additional gene, comprised of a hybrid of sequences from the two parental genes, and that this hybrid gene then served as the ancestor to present day hematopoietic defensin genes.

摘要

防御素是从几种哺乳动物中分离出来的一类抗菌肽,在宿主先天防御中具有推测的功能作用。在人类中,某些防御素基因在造血来源的吞噬细胞中表达,而其他基因则在潘氏细胞(小肠的上皮细胞)中表达。在本研究中,我们确定了在潘氏细胞中表达的人类防御素(HD)基因HD - 5和HD - 6的染色体定位。对一组人/仓鼠杂种的分析将HD - 5和HD - 6都定位到了8号染色体上。对含有8号染色体缺失或重复的细胞系DNA进行的Southern印迹分析进一步将这两个基因定位到8p21 - pter。使用HD - 5探针进行的中期染色体荧光原位杂交分析进一步支持了区域图谱定位。先前的研究已将造血基因定位到8号染色体p23,当前的工作与肠道和髓系防御素基因都位于8号染色体的同一细胞遗传学区域这一情况相符。此外,使用点阵序列分析探讨了该基因家族的进化关系。通过该分析,提出了人类防御素基因可能的进化历史模型。根据该模型,一个原始防御素基因的早期复制产生了当今HD - 5和HD - 6的祖先基因。该模型进一步表明,随后的一次不等位减数分裂交叉事件产生了另一个基因,该基因由两个亲本基因的序列杂交组成,并且这个杂交基因随后成为了当今造血防御素基因的祖先。

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