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晶体状态下构象异构体分布与通过从头算技术计算的构象能量的比较。

Comparison of conformer distributions in the crystalline state with conformational energies calculated by ab initio techniques.

作者信息

Allen F H, Harris S E, Taylor R

机构信息

Cambridge Crystallographic Data Centre, UK.

出版信息

J Comput Aided Mol Des. 1996 Jun;10(3):247-54. doi: 10.1007/BF00355046.

Abstract

The conformational preferences of 12 molecular substructures in the crystalline state have been determined and compared with those predicted for relevant model compounds by ab initio molecular orbital calculations. Least-squares regression shows that there is a statistically significant correlation between the crystal-structure conformer distributions and the calculated potential-energy differences, even though the calculations relate to a gas-phase environment. Torsion angles associated with high strain energy (> 1 kcal mol-1) appear to be very unusual in crystal structures and, in general, high-energy conformers are underrepresented in crystal structures compared with a gas-phase, room-temperature Boltzmann distribution. It is concluded that crystal packing effects rarely have a strong systematic effect on molecular conformations. Therefore, the conformational distribution of a molecular substructure in a series of related crystal structures is likely to be a good guide to the corresponding gas-phase potential energy surface.

摘要

已确定了12种分子亚结构在晶体状态下的构象偏好,并通过从头算分子轨道计算将其与相关模型化合物预测的构象偏好进行了比较。最小二乘法回归表明,尽管计算涉及气相环境,但晶体结构构象异构体分布与计算出的势能差之间存在统计学上的显著相关性。与高应变能(>1千卡/摩尔)相关的扭转角在晶体结构中似乎非常不寻常,一般来说,与气相室温玻尔兹曼分布相比,高能量构象异构体在晶体结构中的占比不足。得出的结论是,晶体堆积效应很少对分子构象产生强烈的系统影响。因此,一系列相关晶体结构中分子亚结构的构象分布可能是相应气相势能面的良好指南。

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