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与吖啶衍生物共价连接的寡核苷酸的合成及结合特性:染料连接位点影响的新研究

Synthesis and binding properties of oligonucleotides covalently linked to an acridine derivative: new study of the influence of the dye attachment site.

作者信息

Asseline U, Bonfils E, Dupret D, Thuong N T

机构信息

Centre de Biophysique Moléculaire, CNRS, Rue Charles Sadron, 45071 Orléans, France.

出版信息

Bioconjug Chem. 1996 May-Jun;7(3):369-79. doi: 10.1021/bc960024o.

DOI:10.1021/bc960024o
PMID:8816962
Abstract

2-Methoxy-6-chloro-9-aminoacridine has been coupled via a polymethylene linker to various positions of an oligonucleotide chain: the 3'-position, using a new universal support, the 5'-position, and both 5'- and 3'-positions via a phosphate. The intercalating agent was also linked to the oligonucleotide chain via an internucleotide phosphorothiolate. The mixture of diastereoisomers was obtained as well as each pure Rp and Sp isomer. Finally, the acridine moiety was introduced to the 5-position of the deoxyuridine. The binding properties of these oligonucleotide-acridine conjugates with their DNA counterparts have been studied by absorption spectroscopy.

摘要

2-甲氧基-6-氯-9-氨基吖啶已通过多亚甲基连接体连接到寡核苷酸链的不同位置:使用新型通用载体连接到3'位置,连接到5'位置,以及通过磷酸基团连接到5'和3'位置。嵌入剂还通过核苷酸间硫代磷酸酯连接到寡核苷酸链上。得到了非对映异构体混合物以及每种纯的Rp和Sp异构体。最后,将吖啶部分引入脱氧尿苷的5-位。通过吸收光谱研究了这些寡核苷酸-吖啶缀合物与其DNA对应物的结合特性。

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1
Synthesis and binding properties of oligonucleotides covalently linked to an acridine derivative: new study of the influence of the dye attachment site.与吖啶衍生物共价连接的寡核苷酸的合成及结合特性:染料连接位点影响的新研究
Bioconjug Chem. 1996 May-Jun;7(3):369-79. doi: 10.1021/bc960024o.
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Synthesis and properties of an oligonucleotide modified with an acridine derivative at the artificial abasic site.在人工无碱基位点用吖啶衍生物修饰的寡核苷酸的合成与性质
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Synthesis and binding properties of oligo-2'-deoxyribonucleotides conjugated with triple-helix-specific intercalators: benzo[e] and benzo[g] pyridoindoles.与三链螺旋特异性嵌入剂共轭的寡聚-2'-脱氧核糖核苷酸的合成及结合特性:苯并[e]和苯并[g]吡啶并吲哚。
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Design of phosphoramidite monomer for optimal incorporation of functional intercalator to main chain of oligonucleotide.用于将功能性嵌入剂最佳地掺入寡核苷酸主链的亚磷酰胺单体的设计。
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Excited-state photophysics of an acridine derivative selectively intercalated in duplex DNA.
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Oligodeoxynucleotides covalently linked to intercalating dyes as base sequence-specific ligands. Influence of dye attachment site.作为碱基序列特异性配体的与嵌入染料共价连接的寡脱氧核苷酸。染料连接位点的影响。
EMBO J. 1984 Apr;3(4):795-800. doi: 10.1002/j.1460-2075.1984.tb01887.x.
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Oligo-alpha-thymidylates covalently linked to intercalating agents: circular dichroism studies of their interaction with complementary sequences.与嵌入剂共价连接的寡聚α-胸苷酸:其与互补序列相互作用的圆二色性研究
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Synthesis and hybridization properties of the conjugates of oligonucleotides and stabilization agents. Part 3.寡核苷酸与稳定剂缀合物的合成及杂交特性。第3部分。
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[New substances with high specific activity for nucleic acid sequences: oligodeoxynucleotides covalently linked to an intercalating agent].[对核酸序列具有高比活性的新物质:与嵌入剂共价连接的寡脱氧核苷酸]
C R Seances Acad Sci III. 1983;297(7):369-72.

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