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一种新的棕色固氮菌甘露糖醛酸 C-5- 差向异构酶基因(algG)是一个 alg 基因簇的一部分,该基因簇的物理组织方式与铜绿假单胞菌中的类似。

A new Azotobacter vinelandii mannuronan C-5-epimerase gene (algG) is part of an alg gene cluster physically organized in a manner similar to that in Pseudomonas aeruginosa.

作者信息

Rehm B H, Ertesvåg H, Valla S

机构信息

Lehrstuhl für Mikrobiologie der Mikroorganismen, Ruhr-Universität Bochum, Germany.

出版信息

J Bacteriol. 1996 Oct;178(20):5884-9. doi: 10.1128/jb.178.20.5884-5889.1996.

Abstract

Alginate is an unbranched polysaccharide composed of the two sugar residues beta-D-mannuronic acid (M) and alpha-L-guluronic acid (G). The M/G ratio and sequence distribution in alginates vary and are of both biological and commercial significance. We have previously shown that a family of highly related mannuronan C-5-epimerase genes (algE1 to -E5) controls these parameters in Azotobacter vinelandii, by catalyzing the Ca2+-dependent conversion of M to G at the polymer level. In this report, we describe the cloning and expression of a new A. vinelandii epimerase gene (here designated algG), localized 29 nucleotides downstream of the previously described gene algJ. Sequence alignments show that algG does not belong to the same class of genes as algE1 to -E5 but that it shares 66% sequence identity with a previously described mannuronan C-5-epimerase gene (also designated algG) from Pseudomonas aeruginosa. A. vinelandii algG was expressed in Escherichia coli, and the enzyme was found to catalyze epimerization in the absence of Ca2+, although the presence of the cation stimulated the activity moderately. Surprisingly, all activity was blocked by Zn2+. P. aeruginosa AlgG has been reported to contain an N-terminal export signal sequence which is cleaved off during expression in E. coli. This does not happen with A. vinelandii AlgG, which appears to be produced at least partly in an insoluble form when expressed at high levels in E. coli. DNA sequencing analyses of the regions flanking algG suggest that the gene is localized in a cluster of genes putatively involved in alginate biosynthesis, and the organization of this cluster appears to be the same as previously described for P. aeruginosa.

摘要

藻酸盐是一种由β-D-甘露糖醛酸(M)和α-L-古洛糖醛酸(G)这两种糖残基组成的无分支多糖。藻酸盐中的M/G比例和序列分布各不相同,具有生物学和商业意义。我们之前已经表明,一个高度相关的甘露糖醛酸C-5-表异构酶基因家族(algE1至-E5)通过在聚合物水平催化M向G的Ca2+依赖性转化,控制了维氏固氮菌中的这些参数。在本报告中,我们描述了维氏固氮菌一个新的表异构酶基因(此处命名为algG)的克隆和表达,该基因位于先前描述的algJ基因下游29个核苷酸处。序列比对表明,algG与algE1至-E5不属于同一类基因,但它与先前描述的来自铜绿假单胞菌的甘露糖醛酸C-5-表异构酶基因(也命名为algG)具有66%的序列同一性。维氏固氮菌algG在大肠杆菌中表达,发现该酶在没有Ca2+的情况下也能催化表异构化,尽管阳离子的存在会适度刺激其活性。令人惊讶的是,所有活性都被Zn2+阻断。据报道,铜绿假单胞菌AlgG含有一个N端输出信号序列,在大肠杆菌中表达时会被切除。维氏固氮菌AlgG并非如此,当在大肠杆菌中高水平表达时,它似乎至少部分以不溶性形式产生。对algG侧翼区域的DNA测序分析表明,该基因位于一个推测参与藻酸盐生物合成的基因簇中,并且这个基因簇的组织方式似乎与先前描述的铜绿假单胞菌相同。

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