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水稻白叶病毒RNA-2序列。

Sequence of rice hoja blanca tenuivirus RNA-2.

作者信息

De Miranda J R, Muñoz M, Wu R, Hull R, Espinoza A M

机构信息

CIBCM, Universidad de Costa Rica, San José, Costa Rica.

出版信息

Virus Genes. 1996;12(3):231-7. doi: 10.1007/BF00284643.

DOI:10.1007/BF00284643
PMID:8883360
Abstract

The sequence of rice hoja blanca tenuivirus RNA-2 is analysed and compared to its counter-part in rice stripe tenuivirus. The RNA encodes two proteins, in an ambisense arrangement. The 94 kD pc2, located in the complementary sense RNA, has several features typical of viral membrane (glyco)proteins, and also has regions of local homology to the glycoproteins of the Phleboviruses (Bunyaviridae). The 23 kD pv2 lies in the viral sense RNA and has two small conserved domains that are almost exclusively found in retro-viral membrane glycoproteins. Its genome location is analogous to the NSm protein of several of the Bunyaviridae species, which is thought to have a membrane-related function. The two open reading frames are separated by a large intergenic region which, in common with the other tenuivirus ambisense RNA segments, has a short region that is highly conserved between RStV and RHBV. The significance of these results with respect to the virus structure and gene expression is discussed.

摘要

对水稻白叶病毒RNA - 2的序列进行了分析,并将其与其在水稻条纹病毒中的对应序列进行了比较。该RNA以双义排列编码两种蛋白质。位于互补义RNA中的94 kD pc2具有病毒膜(糖)蛋白的几个典型特征,并且还与白蛉病毒(布尼亚病毒科)的糖蛋白具有局部同源区域。23 kD pv2位于病毒义RNA中,具有两个几乎仅在逆转录病毒膜糖蛋白中发现的小保守结构域。其基因组位置类似于几种布尼亚病毒科物种的NSm蛋白,被认为具有与膜相关的功能。两个开放阅读框由一个大的基因间隔区隔开,该间隔区与其他纤细病毒双义RNA片段一样,有一个在水稻条纹病毒和水稻白叶病毒之间高度保守的短区域。讨论了这些结果对于病毒结构和基因表达的意义。

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本文引用的文献

1
Tospoviruses: diagnosis, molecular biology, phylogeny, and vector relationships.番茄斑萎病毒属:诊断、分子生物学、系统发育及介体关系
Annu Rev Phytopathol. 1992;30:315-48. doi: 10.1146/annurev.py.30.090192.001531.
2
Sequence of echinochloa hoja blanca tenuivirus RNA-5.白叶稗矮缩病毒RNA - 5序列。
Virus Genes. 1996;12(2):131-4. doi: 10.1007/BF00572951.
3
Sequence comparison and classification of beet luteovirus isolates.甜菜黄化病毒分离株的序列比较与分类
Virus Genes. 2001 Jun;22(3):329-33. doi: 10.1023/a:1011122508545.
4
In vivo transfer of barley stripe mosaic hordeivirus ribonucleotides to the 5' terminus of maize stripe tenuivirus RNAs.大麦条纹花叶病毒核糖核苷酸在体内向玉米条纹纤细病毒RNA 5'末端的转移
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Comparison of Colombian and Costa Rican strains of rice hoja blanca tenuivirus.哥伦比亚和哥斯达黎加水稻白叶病毒株系的比较。
Virus Genes. 1997;15(3):191-3. doi: 10.1023/a:1007974728671.
6
Characterization of the in vitro activity of the RNA-dependent RNA polymerase associated with the ribonucleoproteins of rice hoja blanca tenuivirus.与水稻白叶病毒核糖核蛋白相关的RNA依赖RNA聚合酶的体外活性表征
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4
Sequence of the PV2 gene of rice hoja blanca tenuivirus RNA-2.水稻白叶病毒RNA - 2的PV2基因序列。
Virus Genes. 1995;10(3):205-9. doi: 10.1007/BF01701809.
5
Nucleotide sequence and possible ambisense coding strategy of rice stripe virus RNA segment 2.水稻条纹病毒RNA片段2的核苷酸序列及可能的双义编码策略
J Gen Virol. 1993 Apr;74 ( Pt 4):769-73. doi: 10.1099/0022-1317-74-4-769.
6
Maize stripe virus RNA5 is of negative polarity and encodes a highly basic protein.玉米条纹病毒RNA5呈负链极性,编码一种高度碱性的蛋白质。
J Gen Virol. 1993 Apr;74 ( Pt 4):549-54. doi: 10.1099/0022-1317-74-4-549.
7
Expression of the Bunyamwera virus M genome segment and intracellular localization of NSm.布尼亚姆韦拉病毒M基因组片段的表达及NSm的细胞内定位
Virology. 1993 Aug;195(2):511-20. doi: 10.1006/viro.1993.1402.
8
Complete nucleotide sequence and coding strategy of rice hoja blanca virus RNA4.水稻白叶病毒RNA4的完整核苷酸序列及编码策略
J Gen Virol. 1993 Nov;74 ( Pt 11):2463-8. doi: 10.1099/0022-1317-74-11-2463.
9
Effective amplification of long targets from cloned inserts and human genomic DNA.从克隆插入片段和人类基因组DNA中有效扩增长片段靶标。
Proc Natl Acad Sci U S A. 1994 Jun 7;91(12):5695-9. doi: 10.1073/pnas.91.12.5695.
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PCR amplification of up to 35-kb DNA with high fidelity and high yield from lambda bacteriophage templates.从λ噬菌体模板中以高保真度和高产量进行高达35千碱基DNA的PCR扩增。
Proc Natl Acad Sci U S A. 1994 Mar 15;91(6):2216-20. doi: 10.1073/pnas.91.6.2216.