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固态蛋白质的动态结构。1H和13C NMR弛豫研究。

Dynamic structure of proteins in solid state. 1H and 13C NMR relaxation study.

作者信息

Krushelnitsky A G, Fedotov V D, Spevacek J, Straka J

机构信息

Kazan Institute of Biology, Russian Academy of Sciences, Russia.

出版信息

J Biomol Struct Dyn. 1996 Oct;14(2):211-24. doi: 10.1080/07391102.1996.10508110.

Abstract

Temperature dependencies of 1H non-selective NMR T1 and T2 relaxation times measured at two resonance frequencies and natural abundance 13C NMR relaxation times T1 and T1r measured at room temperature have been studied in a set of dry and wet solid proteins - Bacterial RNase, lysozyme and Bovine serum albumin (BSA). The proton and carbon data were interpreted in terms of a model supposing three kinds of internal motions in a protein. These are rotation of the methyl protons around the axis of symmetry of the methyl group, and fast and slow oscillations of all atoms. The correlation times of these motions in solid state are found around 10(-11), 10(-9) and 10(-6)s, respectively. All kinds of motion are characterized by the inhomogeneous distribution of the correlation times. The protein dehydration affects only the slow internal motion. The amplitude of the slow motion obtained from the carbon data is substantially less than that obtained from the proton data. This difference can be explained by taking into account different relative inter- and intra- chemical group contributions to the proton and carbon second moments. The comparison of the solid state and solution proton relaxation data showed that the internal protein dynamics in these states is different: the slow motion seems to be few orders of magnitude faster in solution.

摘要

在一组干燥和湿润的固体蛋白质——细菌核糖核酸酶、溶菌酶和牛血清白蛋白(BSA)中,研究了在两个共振频率下测得的1H非选择性核磁共振T1和T2弛豫时间以及在室温下测得的天然丰度13C核磁共振弛豫时间T1和T1r的温度依赖性。质子和碳的数据根据一个假设蛋白质中存在三种内部运动的模型进行了解释。这些运动是甲基质子围绕甲基对称轴的旋转,以及所有原子的快速和慢速振荡。在固态中,这些运动的相关时间分别约为10^(-11)、10^(-9)和10^(-6)s。所有类型的运动都以相关时间的不均匀分布为特征。蛋白质脱水仅影响慢速内部运动。从碳数据获得的慢速运动幅度明显小于从质子数据获得的幅度。考虑到不同化学基团对质子和碳二阶矩的相对内部和内部贡献,可以解释这种差异。固态和溶液质子弛豫数据的比较表明,这些状态下的蛋白质内部动力学不同:溶液中的慢速运动似乎快几个数量级。

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