Tun Z, Honda K, Nakatome M, Islam M N, Bai H, Ogura Y, Kuroki H, Yamazaki M, Terada M, Wakasugi C
Department of Legal Medicine, Osaka University Medical School, Japan.
J Forensic Sci. 1996 Nov;41(6):1027-30.
We reported a new approach of ABO genotyping by a polymerase chain reaction and restriction fragment length polymorphism method. Instead of amplifying the loci containing the positions of nucleotides 258 and 700 of cDNA of the A transferase separately, we successfully amplified these 2 loci together in one reaction mixture using 2 sets of primers. The amplified DNA products were digested at the same time with restriction enzymes Kpn I and Alu I. The digested DNA products were then separated by electrophoresis on polyacrylamide gel. In addition, we evaluated the influence of various amplification parameters (concentration of template DNA, primers, Taq DNA polymerase, MgCl2, and number of cycles). In particular, high Mg2+ concentration (3.5 mM) made effective amplification of this locus without producing any unspecific band. By using that optimized condition for PCR, together with a simultaneous approach, our study proved to be time saving, more economic, and convenient in interpreting the results.
我们报道了一种通过聚合酶链反应和限制性片段长度多态性方法进行ABO基因分型的新方法。我们不是分别扩增包含A转移酶cDNA核苷酸258和700位置的位点,而是使用两组引物在一个反应混合物中成功地同时扩增了这两个位点。扩增的DNA产物同时用限制性内切酶Kpn I和Alu I进行消化。然后将消化后的DNA产物在聚丙烯酰胺凝胶上进行电泳分离。此外,我们评估了各种扩增参数(模板DNA、引物、Taq DNA聚合酶、MgCl2的浓度以及循环次数)的影响。特别是,高Mg2+浓度(3.5 mM)能够有效扩增该位点,且不产生任何非特异性条带。通过使用优化的PCR条件以及同步方法,我们的研究证明在解释结果时节省时间、更经济且方便。