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Structure and mechanism of interleukin-1 beta converting enzyme.白细胞介素-1β转化酶的结构与机制。
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Characterization of the gene encoding the glutamic-acid-specific protease of Streptomyces griseus.
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Structure of human rhinovirus 3C protease reveals a trypsin-like polypeptide fold, RNA-binding site, and means for cleaving precursor polyprotein.人鼻病毒3C蛋白酶的结构揭示了一种胰蛋白酶样多肽折叠、RNA结合位点以及切割前体多聚蛋白的方式。
Cell. 1994 Jun 3;77(5):761-71. doi: 10.1016/0092-8674(94)90059-0.
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Biochem Biophys Res Commun. 1967 Apr 20;27(2):157-62. doi: 10.1016/s0006-291x(67)80055-x.
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Purification and properties of an extracellular protease of Staphylococcus aureus.金黄色葡萄球菌一种细胞外蛋白酶的纯化及特性
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7
Staphylococcal protease: a proteolytic enzyme specific for glutamoyl bonds.葡萄球菌蛋白酶:一种对谷氨酰键具有特异性的蛋白水解酶。
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Molecular analysis of the gene encoding alpha-lytic protease: evidence for a preproenzyme.编码α-裂解蛋白酶的基因的分子分析:前体酶原的证据
Gene. 1988 Sep 30;69(2):237-44. doi: 10.1016/0378-1119(88)90434-9.
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Viral cysteine proteases are homologous to the trypsin-like family of serine proteases: structural and functional implications.病毒半胱氨酸蛋白酶与丝氨酸蛋白酶的胰蛋白酶样家族同源:结构和功能意义。
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Synonymous codon usage in Bacillus subtilis reflects both translational selection and mutational biases.枯草芽孢杆菌中的同义密码子使用情况既反映了翻译选择,也反映了突变偏好。
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灰色链霉菌谷氨酸特异性蛋白酶S1结合位点的表征

Characterization of the S1 binding site of the glutamic acid-specific protease from Streptomyces griseus.

作者信息

Stennicke H R, Birktoft J J, Breddam K

机构信息

Carlsberg Laboratory, Department of Chemistry, Copenhagen, Denmark.

出版信息

Protein Sci. 1996 Nov;5(11):2266-75. doi: 10.1002/pro.5560051113.

DOI:10.1002/pro.5560051113
PMID:8931145
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2143298/
Abstract

The glutamic acid-specific protease from Streptomyces griseus (SGPE) is an 18.4-kDa serine protease with a distinct preference for Glu in the P1 position. Other enzymes characterized by a strong preference for negatively charged residues in the P1 position, e.g., interleukin-1 beta converting enzyme (ICE), use Arg or Lys residues as counterions within the S1 binding site. However, in SGPE, this function is contributed by a His residue (His 213) and two Ser residues (Ser 192 and S216). It is demonstrated that proSGPE is activated autocatalytically and dependent on the presence of a Glu residue in the -1 position. Based on this observation, the importance of the individual S1 residues is evaluated considering that enzymes unable to recognize a Glu in the P1 position will not be activated. Among the residues constituting the S1 binding site, it is demonstrated that His 213 and Ser 192 are essential for recognition of Glu in the P1 position, whereas Ser 216 is less important for catalysis out has an influence on stabilization of the ground state. From the three-dimensional structure, it appears that His 213 is linked to two other His residues (His 199 and His 228), forming a His triad extending from the S1 binding site to the back of the enzyme. This hypothesis has been tested by substitution of His 199 and His 228 with other amino acid residues. The catalytic parameters obtained with the mutant enzymes, as well as the pH dependence, do not support this theory; rather, it appears that His 199 is responsible for orienting His 213 and that His 228 has no function associated with the recognition of Glu in P1.

摘要

来自灰色链霉菌的谷氨酸特异性蛋白酶(SGPE)是一种18.4 kDa的丝氨酸蛋白酶,对P1位置的Glu有明显偏好。其他在P1位置对带负电荷残基有强烈偏好的酶,例如白细胞介素-1β转化酶(ICE),在S1结合位点内使用Arg或Lys残基作为反离子。然而,在SGPE中,该功能由一个His残基(His 213)和两个Ser残基(Ser 192和Ser 216)贡献。已证明proSGPE可自动催化激活,且依赖于 -1位置Glu残基的存在。基于此观察结果,考虑到无法识别P1位置Glu的酶将不会被激活,对各个S1残基的重要性进行了评估。在构成S1结合位点的残基中,已证明His 213和Ser 192对于识别P1位置的Glu至关重要,而Ser 216对催化作用不太重要,但对基态的稳定有影响。从三维结构来看,His 213似乎与另外两个His残基(His 199和His 228)相连,形成了一个从S1结合位点延伸到酶背面的His三联体。通过用其他氨基酸残基取代His 199和His 228对这一假设进行了测试。突变酶获得的催化参数以及pH依赖性均不支持该理论;相反,似乎His 199负责定位His 213,而His 228与识别P1位置的Glu无关。