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在再生细菌视紫红质中检测到一个与蛋白质和磷脂头部基团配位的Yb3+结合位点。

Detection of a Yb3+ binding site in regenerated bacteriorhodopsin that is coordinated with the protein and phospholipid head groups.

作者信息

Roselli C, Boussac A, Mattioli T A, Griffiths J A, el-Sayed M A

机构信息

Section de Bioénergetique, Commissariat á l'Energie Atomique Saclay, Gif-sur-Yvette, France.

出版信息

Proc Natl Acad Sci U S A. 1996 Dec 10;93(25):14333-7. doi: 10.1073/pnas.93.25.14333.

DOI:10.1073/pnas.93.25.14333
PMID:8962051
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC26132/
Abstract

Near infrared Yb3+ vibronic sideband spectroscopy was used to characterize specific lanthanide binding sites in bacteriorhodopsin (bR) and retinal free bacteriorhodopsin (bO). The VSB spectra for deionized bO regenerated with a ratio of 1:1 and 2:1 ion to bO are identical. Application of a two-dimensional anti-correlation technique suggests that only a single Yb3+ site is observed. The Yb3+ binding site in bO is observed to consist of PO2- groups and carboxylic acid groups, both of which are bound in a bidentate manner. An additional contribution most likely arising from a phenolic group is also observed. This implies that the ligands for the observed single binding site are the lipid head groups and amino acid residues. The vibronic sidebands of Yb3+ in deionized bR regenerated at a ratio of 2:1 ion to bR are essentially identical to those in bO. The other high-affinity binding site is thus either not evident or its fluorescence is quenched. A discussion is given on the difference in binding of Ca2+ (or Mg2+) and lanthanides in phospholipid membrane proteins.

摘要

近红外Yb3+振动边带光谱被用于表征细菌视紫红质(bR)和无视网膜细菌视紫红质(bO)中特定的镧系元素结合位点。用离子与bO的比例为1:1和2:1再生的去离子bO的VSB光谱是相同的。二维反相关技术的应用表明只观察到一个单一的Yb3+位点。观察到bO中的Yb3+结合位点由PO2-基团和羧酸基团组成,两者均以双齿方式结合。还观察到最有可能来自酚基团的额外贡献。这意味着观察到的单一结合位点的配体是脂质头部基团和氨基酸残基。以离子与bR的比例为2:1再生的去离子bR中Yb3+的振动边带与bO中的基本相同。因此,另一个高亲和力结合位点要么不明显,要么其荧光被淬灭。文中讨论了Ca2+(或Mg2+)与镧系元素在磷脂膜蛋白中结合的差异。

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本文引用的文献

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Nature of the individual Ca binding sites in Ca-regenerated bacteriorhodopsin.个体钙离子结合位点在钙离子再生菌视紫红质中的性质。
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Circular dichroism and photocycle kinetics of partially detergent solubilized and partially retinal regenerated bacteriorhodopsin.部分去污剂溶解和部分视黄醛再生菌紫质的圆二色性和光循环动力学。
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Cation binding by bacteriorhodopsin.细菌视紫红质的阳离子结合。
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Binding of a single divalent cation directly correlates with the blue-to-purple transition in bacteriorhodopsin.单个二价阳离子的结合与细菌视紫红质中的蓝色到紫色转变直接相关。
Proc Natl Acad Sci U S A. 1991 Jan 1;88(1):149-53. doi: 10.1073/pnas.88.1.149.
5
The Ca2+ binding to deionized monomerized and to retinal removed bacteriorhodopsin.钙离子与去离子化的单体化以及去除视黄醛的细菌视紫红质结合。
Biophys J. 1995 Nov;69(5):2056-9. doi: 10.1016/S0006-3495(95)80075-5.
6
Effects of genetic replacements of charged and H-bonding residues in the retinal pocket on Ca2+ binding to deionized bacteriorhodopsin.视网膜口袋中带电和氢键残基的基因置换对Ca2+与去离子细菌视紫红质结合的影响。
Proc Natl Acad Sci U S A. 1993 Feb 15;90(4):1445-9. doi: 10.1073/pnas.90.4.1445.
7
The C-terminus and the Ca2+ low-affinity binding sites in bacteriorhodopsin.细菌视紫红质中的C末端和钙离子低亲和力结合位点。
Biochemistry. 1993 Dec 28;32(51):14173-5. doi: 10.1021/bi00214a015.
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Salt and pH-dependent changes of the purple membrane absorption spectrum.紫膜吸收光谱的盐和pH依赖性变化。
Photochem Photobiol. 1984 Nov;40(5):641-6. doi: 10.1111/j.1751-1097.1984.tb05353.x.
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Isolation of the cell membrane of Halobacterium halobium and its fractionation into red and purple membrane.嗜盐菌细胞膜的分离及其分成红色膜和紫色膜的分级分离。
Methods Enzymol. 1974;31:667-78. doi: 10.1016/0076-6879(74)31072-5.